Pairwise Alignments

Query, 338 a.a., protein containing LysM domain from Marinobacter adhaerens HP15

Subject, 391 a.a., LysM peptidoglycan-binding domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (441), Expect = 3e-48
 Identities = 107/352 (30%), Positives = 182/352 (51%), Gaps = 22/352 (6%)

Query: 2   RKLLYALAATTLL---ITSWAHAAPELRSDHPERYTVVKGDTLWDISARFLNNPWYWPEI 58
           R + YAL   TLL   +T+       L+ + P  YTVVKGDTLWDISA +L++PW WP +
Sbjct: 22  RYITYALLPFTLLSGQVTADEQTPLALKPNAPTTYTVVKGDTLWDISALYLDSPWLWPRL 81

Query: 59  WHVNPQVANPHLIYPGDRLALVYIDGKPRITKVASNDVVKLSPKVRSEPIDTPIPAIPLD 118
           W VNP++ NPHLIYPGD+L L + DG+P   +++   + KLSP+VR       +P +   
Sbjct: 82  WQVNPEIDNPHLIYPGDKLTLFWRDGQP---ELSLKPMRKLSPQVRVLE-KQAVPTVQEG 137

Query: 119 AIGSFLTDTRIVSPEEINGAPYVLEGEDGRIITGAGDKLYARGEKPADKVGVFRRSKEFR 178
            +  +L   R+++   + G+  V+   +GR      D+LY  G     K G++R   +++
Sbjct: 138 LVLPYLQSDRLMAKTALQGSVRVIGSSEGRQYLTKQDQLYISGVHSEKKWGIYREVAQYQ 197

Query: 179 DPDTGEFLGLEARSIARGDVARENGDVLTVNLTSSSEEVRIGDRLMVS---EDRRLTTSF 235
             D    + +  R +A G++A   G+   ++L   ++E+   D  +     E+R+L+T+F
Sbjct: 198 RDDE---VMVALRLVAVGELAMTGGNFSGLSLLEQNQEILANDIALPEVDLEERQLSTTF 254

Query: 236 VPSAPDQDIEGQMISVDGGVSQIGQFDVVAINRGTREGLEAGNVMAVLKSGNLVRDPVTG 295
            P       E +++    G    GQ  VV I++G  +G+  G++  + ++   V+     
Sbjct: 255 YPQPAPAGSEARILGSLEGSQYAGQNQVVVIDQGRSDGVAQGSMFELYQAAVQVKAKQDS 314

Query: 296 ET---------IELPSERAGLLMVFQAYEKMSYGLVLQASRVLTVGDKVTNP 338
            T         ++LPS + G LMV + YE+ S  L+  +S  ++      +P
Sbjct: 315 STFLSERSNTDVQLPSVKVGALMVIRPYERFSLALITNSSAPISAEVHALSP 366