Pairwise Alignments

Query, 765 a.a., Rad3-related DNA helicase from Marinobacter adhaerens HP15

Subject, 754 a.a., ATP-dependent DNA helicase from Pseudomonas fluorescens FW300-N2E3

 Score =  708 bits (1827), Expect = 0.0
 Identities = 380/762 (49%), Positives = 498/762 (65%), Gaps = 20/762 (2%)

Query: 1   MTVTVAVRTLCEFAARKGDLDFRYTPAPSAEEGIAGHQAIQSRRGYGYKSEHLLTGECMG 60
           ++ +VAVR LCEF A+ GDLD R+TP+P+A EGI GH+ + SRR   Y++E  L GE   
Sbjct: 1   VSYSVAVRALCEFTAKVGDLDLRFTPSPTALEGIVGHRTVASRRSETYQNEVALEGEYRQ 60

Query: 61  LLLSGRADIYNPHRGRLEEIKTHRGDLSRIREHQRALHRAQLRAYGALLCRQENRKTLEL 120
           L + GRAD Y+P + RLEEIKT+RG+L R+  + R LH AQ + YG L+C++     ++L
Sbjct: 61  LTVRGRADGYDPDQNRLEEIKTYRGELERMPVNHRQLHWAQAKIYGWLMCQKLQLAEIKL 120

Query: 121 ALIYYDTGRDKETPVVETASAEELWQELETLCSHYKAWAEQEEHHREQRNVLLSGLRFPF 180
           AL+Y+D   +KET +VET SA EL       C  +  WAEQE  HRE RN     L F +
Sbjct: 121 ALVYFDIVSEKETSLVETWSALELEHFFTLQCGLFLQWAEQEMAHREARNQAAQVLGFAY 180

Query: 181 PAFRPRQRQLAETVYKNSVKSGTLLLEAPTGLGKTLGTLFPALMAMPAAGQDRLFYLTCR 240
           P FRP QR LAE+V+K       L+ +APTG+GKT+GTLFP L A      D++F+LT +
Sbjct: 181 PDFRPGQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFPMLKAFAPQQLDKVFFLTAK 240

Query: 241 NTARQLAMDAVGRLRSAQAAQHWPLRTLELVSKDDACEHPDKACHGDSCPLAKGFFDRLP 300
              R+LA+DA   +     +   PLR LE++++D ACEH DKACHG+SCPLAKGF+DRLP
Sbjct: 241 TPGRKLALDAAQVI--VDNSDGLPLRVLEMIARDKACEHLDKACHGESCPLAKGFYDRLP 298

Query: 301 DARAEAAQSEGTLDQHALAKIAAGHDICPYFLAQEMARWSDVVIGDVNRLFDQSALLHGL 360
            AR EAA     LDQ AL +IA  H +CPY+L+QEMARW+DVV+ D N  FD SALL GL
Sbjct: 299 AAR-EAASRVTLLDQAALREIALEHQVCPYYLSQEMARWADVVVADYNYYFDFSALLFGL 357

Query: 361 IRQNSWKASVLVDEAHNLVDRGRGMYSVRLDQQRLLRIKKTAPKPLKSAIDRTARAWQSL 420
            + N WK +VLVDEAHNLV+RGR MYS  LDQ  L  ++K+AP+ LK ++ R  R W +L
Sbjct: 358 AQANQWKVAVLVDEAHNLVERGRQMYSASLDQFALNTLRKSAPEVLKKSLQRVNREWNAL 417

Query: 421 ----IRDCQADTQSPEFLETLPTQLLGALQAMVSNLTDYLADNPP--DLALQELLFESVA 474
               I   QA  ++PE       +LL AL    + + DYL D+P   D A+Q   F+++ 
Sbjct: 418 HKTQISPYQAYAKAPE-------KLLQALSLCTTAIGDYLNDHPQGLDAAVQSFYFDALQ 470

Query: 475 FIKLADSFGDHSLCEFQRAGRGR----ASLTIQNLIPADFLRERFEAAHSVLLFSATLSP 530
           F ++A+ F +H L +  +   G     + L ++N++PA F+R R  AA S ++FSATLSP
Sbjct: 471 FSRVAELFDEHFLFDISKRDLGNTRSLSQLCLRNVVPAGFIRPRLTAARSTVMFSATLSP 530

Query: 531 GVYYRDLLGLPEDSRFTSLPSPFSADQLRVQFTPGISTRQVHREASLKPIADLIARQFRD 590
             YY DLLGLP  + +  + SPF+A+QL+VQ    ISTR VHR+ASL PI +L+ARQF +
Sbjct: 531 QRYYADLLGLPATTVWIDVESPFNAEQLKVQIVSRISTRFVHRQASLAPIVELMARQFIE 590

Query: 591 RPGHYLAFFSSFKYAKQASDALAEQAPDIPQRAQQPGMSPQQRADFLAGFRNPEGSVAFA 650
           RPG+YLAFFSSF Y +Q +   AE  P I   +Q  GM   +R  FL  F      + FA
Sbjct: 591 RPGNYLAFFSSFDYLQQVAQLFAETWPQINLWSQSRGMDEARRQAFLEQFTPTSQGIGFA 650

Query: 651 VLGGVFSEGIDLPGDQLIGAFVATLGLPPFDAWHEILKVRLEKRFGAGYDYTYLIPGLQK 710
           VLGG F EGIDLPG +LIGAF+ATLGL   +  +E LK R+   F AGYDYTYL PG+QK
Sbjct: 651 VLGGAFGEGIDLPGSRLIGAFIATLGLAQLNPVNEQLKQRMAAIFDAGYDYTYLFPGVQK 710

Query: 711 VAQAAGRVIRTPEDRGVIWLIDDRFLQPAISRFFPRWWFAEG 752
           V QAAGRVIRT +D+GV+ LIDDRF +  + +  PRWW   G
Sbjct: 711 VVQAAGRVIRTQQDQGVVMLIDDRFGESKVQQLLPRWWSVSG 752