Pairwise Alignments

Query, 765 a.a., Rad3-related DNA helicase from Marinobacter adhaerens HP15

Subject, 714 a.a., Helicase c2 from Pseudomonas syringae pv. syringae B728a

 Score = 58.2 bits (139), Expect = 2e-12
 Identities = 72/245 (29%), Positives = 105/245 (42%), Gaps = 29/245 (11%)

Query: 505 LIPADFLRER-FEAAHSVLLFSATLSP-GVY--YRDLLGLPEDSRFTSLPSPFSADQLRV 560
           ++ A+ LR   +  A+  L+ SATL+  G +  YR   GLP+ +    +PSPF      V
Sbjct: 462 ILAAEMLRRNLWNIAYGALVTSATLTALGKFDRYRMRAGLPKGAVTAVVPSPFHHADAGV 521

Query: 561 QFTPGISTRQVHREASLKPIADLIARQFRDRPGHY------LAFFSSFKYAKQASDALAE 614
              P +       +A  +      A   RD PG        L  +SS K  +   D L  
Sbjct: 522 LRVPDL-------KADPRDSVAHTAAIIRDLPGLVEGSRGTLVLYSSRKQMQDVFDGL-- 572

Query: 615 QAPDIPQRAQ---QPGMSPQQRAD-FLAGFRNPEGSVAFAVLGGVFSEGIDLPGDQLIGA 670
              D   R Q   Q  +S Q+  +   A   + E SV F +    F+EG+DLPG      
Sbjct: 573 ---DRDWRKQVFIQGNLSKQETLNKHKARVDSGESSVLFGLAS--FAEGVDLPGAYCEHV 627

Query: 671 FVATLGLP-PFDAWHEILKVRLEKRFGAGYDYTYLIPGLQKVAQAAGRVIRTPEDRGVIW 729
            +A +    P D     L   +E R G  +    +     ++ QA GR++RT EDRG I 
Sbjct: 628 VIAKIPFAVPDDPVEAALAEWIEARGGNPFMEIAVPDASLRLVQACGRLLRTEEDRGTIT 687

Query: 730 LIDDR 734
           L+D R
Sbjct: 688 LLDRR 692



 Score = 26.6 bits (57), Expect = 0.005
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 328 CPYFLAQEMARWSDVVIGDVNRLFDQSALLHGLIRQNSWKASVLVDEAHNLVDRGRGMYS 387
           C ++ A+E     DV++ + + +    AL  G +  +      + DE H+L D+  G ++
Sbjct: 216 CAFYKAREGMGKVDVIVTNHDMVLADLALGGGAVLPDPRDTLYVFDEGHHLPDKAIGHFA 275

Query: 388 VRLDQQRLLRIKKTA 402
                    R+K TA
Sbjct: 276 ------HYTRLKSTA 284