Pairwise Alignments

Query, 866 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Marinobacter adhaerens HP15

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  229 bits (585), Expect = 5e-64
 Identities = 151/473 (31%), Positives = 245/473 (51%), Gaps = 25/473 (5%)

Query: 395  QKIQAQADILKQQKARNEAQTQLNEALTHDPVTGLPNRNRFEWMVDEQLRQNPNGRFMVG 454
            Q I    DI  ++K   +   + N    +D +T LPNR  +   + + L+        V 
Sbjct: 636  QHIGLFLDISNRKKYEQDIWYKSN----YDALTNLPNRQLYTSRLSQMLQLAEQRCCSVA 691

Query: 455  VTRIT--QLKEINRTLGLDRSERLLKAMAEQMTRLASGLPMVHHTVDARGNDERVYQLSG 512
            V  I   + K IN   G    + LL+  A ++  L     +  H   AR        LSG
Sbjct: 692  VLFIDLDRFKYINDIYGHAVGDELLQVAAARLEAL-----LEQHDFVAR--------LSG 738

Query: 513  DSFGLLVNVSKTADDF-QSLDNALKQLAEPVLLDNIAIEPNPRFGAASYPEHGKKAALLI 571
            D F +++  +K   +  Q   N L+ L+ P  ++   +  +   G + YP +G    +L 
Sbjct: 739  DEFVVVMGHTKHQGEIEQRAQNILQHLSSPFGINRNELLISASVGISCYPSNGTSVEVLT 798

Query: 572  RNAHVGMEMAPH-GPYQTGLYSRKDDIYDESRLTLMSDLREALHHNQTELYYQPKISLAT 630
            RNA   M  A   G    G +S   +    +R+TL   LR A+  ++  L+YQP +  ++
Sbjct: 799  RNAETAMYQAKQDGRNCFGYFSPDMNNNMLARITLEQSLRSAVLQHEFCLHYQPIVDTSS 858

Query: 631  GKVVGVEALIRWHHPDRGWVPPIEFVPMAEKTGVIKHLTRWVVDQALNDLKELHALDPAL 690
            G+ V +EAL+RW HP RG VPP EF+P+AE+TG+I+ +  WV+ QAL DL++ H+    +
Sbjct: 859  GEGVALEALLRWRHPQRGLVPPDEFIPIAEETGLIEPIGEWVIQQALRDLRQCHSQGIMI 918

Query: 691  TVSVNISARDLSSPE---LVGLFETRTKRNQLNPEQVIIELTETAAMDDPHRGLSALNEL 747
             +++N+S R L+  +      +     ++  + P+ V IE+TE+  M D    L AL  +
Sbjct: 919  NMAINVSGRQLAHGDPSHFACMLNGLLQKYDVAPQYVHIEITESILMADTELSLKALTAI 978

Query: 748  TAIGLKLSIDDFGAGYSSLSYLKKLPASEIKLDRALLQDIESSEGARMIVETAIRMGQGL 807
              +G+++ +DDFG GYSSLSYLK+ P S IK+D++ + ++        +++  I MGQ L
Sbjct: 979  RHLGVEIYLDDFGTGYSSLSYLKQFPISVIKIDKSFVDNMLEDRADANLIKAIITMGQSL 1038

Query: 808  GYQVVAEGVETEKSARLLNQLGAEMLQGYWICSPKPLHELQAWL-EVERKAPS 859
              ++VAEGVE+E     L  LG + +QGY +  P PL EL+  L  + R+ P+
Sbjct: 1039 DMRLVAEGVESEPQRSFLQGLGCDFVQGYLVAKPMPLKELEPLLRRIVREKPT 1091