Pairwise Alignments

Query, 866 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Marinobacter adhaerens HP15

Subject, 684 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  225 bits (573), Expect = 8e-63
 Identities = 145/461 (31%), Positives = 241/461 (52%), Gaps = 24/461 (5%)

Query: 411 NEAQTQLNEALTHDPVTGLPNRNRFEWMVDEQLRQNPNGR--FMVGVTRITQLKEINRTL 468
           ++ Q++L +  T DP+TGLPNR      +   ++++   +  F +    + + K IN +L
Sbjct: 239 SQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKRSFALMFIDLDRFKNINDSL 298

Query: 469 GLDRSERLLKAMAEQMTRLASGLPMVHHTVDARGNDERVYQLSGDSFGLLVNVSKTADDF 528
           G    ++ L  +A  + R+              G+   V +L GD F +L +   + D  
Sbjct: 299 GHALGDQFLARIARILERVV-------------GDKGSVSRLGGDEFVILADSVHSPDQA 345

Query: 529 QS-LDNALKQLAEPVLLDNIAIEPNPRFGAASYPEHGKKAALLIRNAHVGMEMAPH-GPY 586
              +D  L QL  P+ L+  AI P    G + YPE G  A  LIR+A + M  A   G  
Sbjct: 346 ADFVDKLLVQLNVPIQLNEHAIHPAASIGISIYPEDGSSAEDLIRHADIAMYSAKAAGSN 405

Query: 587 QTGLYSRKDDIYDESRLTLMSDLREALHHNQTELYYQPKISLATGKVVGVEALIRWHHPD 646
           Q   + ++       RL   + L +AL +N+  LY+QPK+ L TGK+ G EALIRW    
Sbjct: 406 QWAFFKQQMTERAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITGCEALIRWQKDG 465

Query: 647 RGWVPPIEFVPMAEKTGVIKHLTRWVVDQALNDLKELHA-LDPALTVSVNISARDLSSPE 705
           R  + P+ F+P+AE+TG+I  + RWV++Q+   L+E     + A+ +++N++++  +   
Sbjct: 466 R-LISPMSFIPVAEETGIIIPIGRWVIEQSCRVLREWQKKYNYAIPIAINVASQQFADAS 524

Query: 706 LVGLFETRTKRNQLNPEQVIIELTETAAMDDPHRGLSALNELTAIGLKLSIDDFGAGYSS 765
           LV   +    R Q+ PE + IE+TET+ M+D    ++ L +L + G  +++DDFG GYSS
Sbjct: 525 LVSDIKQMALRYQIQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSS 584

Query: 766 LSYLKKLPASEIKLDRALLQDIESSEGARMIVETAIRMGQGLGYQVVAEGVETEKSARLL 825
           LSYL+ LP + +K+DR  + D+    G   I  T + +G+ L   +VAEG+E E     L
Sbjct: 585 LSYLRHLPITTMKIDRCFVSDL---PGDSAIASTILMLGKQLNLTIVAEGIENELQLDWL 641

Query: 826 NQLGAEMLQGYWICSPKPLHELQAWLEVERKA--PSLQGLQ 864
                ++ QG++   P P  + +A     + A   +L GL+
Sbjct: 642 KSNECQIGQGFYFSQPLPQADFEALYMASQTATISNLDGLR 682