Pairwise Alignments

Query, 866 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Marinobacter adhaerens HP15

Subject, 1077 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  234 bits (597), Expect = 2e-65
 Identities = 150/468 (32%), Positives = 241/468 (51%), Gaps = 24/468 (5%)

Query: 385  LADRLYREREQKIQAQADILKQQKARNEAQTQLNEALTHDPVTGLPNRNRFEWMVDE--Q 442
            LA  + R    +I     +      R + +  L      D +TGLPNR  F   +    Q
Sbjct: 597  LAITVVRNERGEIIQHIGLFMDISKRKQYEQDLWYQAHFDTLTGLPNRKLFNERLQHEIQ 656

Query: 443  LRQNPNGRFMVGVTRITQLKEINRTLGLDRSERLLKAMAEQMTRLASGLPMVHHTVDARG 502
            L Q+ + +  + +  + Q K IN   G    + LL+ +A+++  +A             G
Sbjct: 657  LAQHDSRKLAILLIDLDQFKYINDVQGHATGDLLLQDVAKRLENIA-------------G 703

Query: 503  NDERVYQLSGDSFGLLVNVSKTADDF---QSLDNALKQLAEPVLLDNIAIEPNPRFGAAS 559
             ++ + ++ GD F L++   +  ++F         ++ L+ P  L+   I+ +  FG   
Sbjct: 704  KNDLIARIGGDEFVLIL--PRVTNEFAIEHMASRIIETLSTPFNLNEREIQISASFGIGV 761

Query: 560  YPEHGKKAALLIRNAHVGMEMAPH-GPYQTGLYSRKDDIYDESRLTLMSDLREALHHNQT 618
            YPE G   + L RN  + M  A   G      ++   +    +R+ L   LR A+  ++ 
Sbjct: 762  YPEDGLDVSSLTRNTEMAMYQAKDAGRNNFKYFTSGMNQAMFARMELEQRLRRAVAQDEF 821

Query: 619  ELYYQPKISLATGKVVGVEALIRWHHPDRGWVPPIEFVPMAEKTGVIKHLTRWVVDQALN 678
             L+YQP + + TGKV  VEALIRW  PD G +PP +F+ +AE+TG+I+ +  WV++QA++
Sbjct: 822  TLHYQPIVEMKTGKVCSVEALIRWQDPDLGLIPPDQFIGIAEETGLIEPMGEWVLNQAMH 881

Query: 679  DLKELHALDPALTVSVNISARDLSSPELVGLFETRTK---RNQLNPEQVIIELTETAAMD 735
            DL++   L   L V++N+S+R   +   +G  +   +   R+ +NP  V IE+TE+  M 
Sbjct: 882  DLRQWQQLGLQLNVAINVSSRQCVNARGMGFDQVLQECFNRHHINPRNVHIEITESMLMG 941

Query: 736  DPHRGLSALNELTAIGLKLSIDDFGAGYSSLSYLKKLPASEIKLDRALLQDIESSEGARM 795
            D    LS L  +  +G ++ IDDFG GYSSLSYLKK P S IK+DR+ +++  S+     
Sbjct: 942  DASHCLSTLEAIRRLGSQIYIDDFGTGYSSLSYLKKFPISVIKIDRSFVENALSNNSNTN 1001

Query: 796  IVETAIRMGQGLGYQVVAEGVETEKSARLLNQLGAEMLQGYWICSPKP 843
            +V+  + MGQ L  ++VAEG+ETE    LL  LG    QGY I  P P
Sbjct: 1002 LVKAIVMMGQSLEMELVAEGIETEAQWNLLRDLGCHYAQGYLISKPLP 1049