Pairwise Alignments

Query, 727 a.a., polynucleotide phosphorylase/polyadenylase from Marinobacter adhaerens HP15

Subject, 699 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  876 bits (2264), Expect = 0.0
 Identities = 452/694 (65%), Positives = 538/694 (77%), Gaps = 6/694 (0%)

Query: 24  LKPFKKSFELGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQPFFPLTV 83
           + P  KSFE G  TVTLETG IARQA G+V+ ++ D +VL TVVG KEA PG+ FFPLTV
Sbjct: 1   MNPIVKSFEYGQHTVTLETGVIARQADGAVMASMGDTTVLVTVVGKKEADPGRDFFPLTV 60

Query: 84  NYFEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVITTVMSSS 143
           NY EKTYA GKIPGGFFKREGRPSE ETL +RLIDRPIRPLFP+ F NEVQVI TV+S  
Sbjct: 61  NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPDDFTNEVQVIITVVSVD 120

Query: 144 KNQDPDIAAMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTSLLDMVVA 203
              +PDI +M+  SAAL+ISGIPF+GP+GA+RVGY N   Y LNP   EL  S LD+VVA
Sbjct: 121 PQIEPDIVSMIGTSAALAISGIPFNGPLGAARVGYVNGE-YVLNPGAAELAGSELDLVVA 179

Query: 204 GTEDAVLMVESEAKGLTEDQMLGGVLYGHQEMQTAVTAIKEFAAEIGKPRWDWQPAAENT 263
           GT+ AVLMVESEAK L E+ MLG V+YGH + Q  + AI EFAAE GKPRW+W    +N 
Sbjct: 180 GTQSAVLMVESEAKSLPEEVMLGAVVYGHDQQQVVINAINEFAAEAGKPRWNWTAPVKNE 239

Query: 264 ELLNAIKADFAGAIEEAYGIRDKMARYERLGEVKAAAVEKLAGEEEGQPSED--EVKKYF 321
            L+  IK      +  AY I  K  RYE +GEVK A + KL   +E  P  +  E     
Sbjct: 240 ALVAQIKELAEEGLTAAYQIMAKQERYEAVGEVKKATIAKL---QEANPDVNVREAADLL 296

Query: 322 GKIEKSVVRQQVIDGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIVTTTLG 381
           G +EK+VVR ++I G PRIDGR+   +R + +  GVLP  HGSALFTRGETQA+VT TLG
Sbjct: 297 GSLEKNVVRGRIIAGMPRIDGREPDMIRALSVMAGVLPRTHGSALFTRGETQALVTCTLG 356

Query: 382 TSRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPT 441
           T RD Q ID++ GER + F+ HYNFPPYSVGE G VG+P RRE+GHG+LA RG+ AVMP+
Sbjct: 357 TERDAQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPS 416

Query: 442 LEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDKFAV 501
            EEFPY++R VSEITESNGSSSMASVCG+SLALMDAGVPIK  VAGIAMGLVKEGD F V
Sbjct: 417 AEEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDNFVV 476

Query: 502 LTDILGDEDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMEIALEQAHAARLHILGEM 561
           L+DILGDEDHLGDMDFKVAGT++GVTALQMDIKI GIT EIMEIAL+QA+ AR+HIL  M
Sbjct: 477 LSDILGDEDHLGDMDFKVAGTRDGVTALQMDIKIEGITKEIMEIALQQAYGARVHILNVM 536

Query: 562 NKVISEPRAELSARAPSITTIKINPEKIRDVIGKGGSVIRAICDETGASIDLDDDGNVKI 621
           ++ I   R ++S  AP ITTIKINPEKIRDVIGKGG+VIRA+ +ETG +I+L+DDG VKI
Sbjct: 537 DQAIGSARPDISDFAPRITTIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVKI 596

Query: 622 YADNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISDR 681
            ++N +A + A+ R++EIT+E+EVG +Y G+V RIVDFGAFVNILPGKDGLVHISQISD 
Sbjct: 597 ASNNGDATREAIRRIEEITSEVEVGRLYTGKVIRIVDFGAFVNILPGKDGLVHISQISDE 656

Query: 682 RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKE 715
           R+ NV+D L   QEV VKV++VD +GRV+LS+KE
Sbjct: 657 RVANVSDHLQLNQEVTVKVMEVDRQGRVRLSIKE 690