Pairwise Alignments

Query, 727 a.a., polynucleotide phosphorylase/polyadenylase from Marinobacter adhaerens HP15

Subject, 756 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  613 bits (1582), Expect = e-180
 Identities = 331/698 (47%), Positives = 455/698 (65%), Gaps = 8/698 (1%)

Query: 33  LGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQPFFPLTVNYFEKTYAV 92
           +GGK + LETGR+A QA G+V V      VL T    +  +    FFPLTV+Y EK YA 
Sbjct: 14  VGGKEIILETGRLANQAHGAVWVQCGGTVVLVTAC-TQPLERDMGFFPLTVDYSEKMYAA 72

Query: 93  GKIPGGFFKRE-GRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVITTVMSSSKNQDPDIA 151
           G+IPG FF+RE GRPSE+ETL SRLIDRP+RPLF  GF +EVQ++  V+S+ +  D D+ 
Sbjct: 73  GRIPGSFFRREIGRPSERETLVSRLIDRPVRPLFTKGFRDEVQILANVISADQENDSDVL 132

Query: 152 AMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTSLLDMVVAGTEDAVLM 211
           A+  ASAALSIS IPF+GP+  +R+G  N   + LNPT +E++ S L +V+A + D+V+M
Sbjct: 133 AVTGASAALSISPIPFEGPVAGARIGRVNGE-FVLNPTMKEMEASDLAIVIAASRDSVVM 191

Query: 212 VESEAKGLTEDQMLGGVLYGHQEMQTAVTAIKEFAAEIGKPRWDWQPAAENTELLNAIKA 271
           VE EA  + ED ++  + + H+E+Q  + A  +    +GK +    P  EN EL   +  
Sbjct: 192 VEGEAHFVPEDVIVAALEWAHKEIQPLIDAQLKLMELVGKAKMAVTPPVENAELKARVAE 251

Query: 272 DFAGAIEEAYGIRDKMARYERLGEVKAAAVEKLAGEE---EGQPSEDEVKKYFGKIEKSV 328
                ++ A  I +KMAR +    VK   +E L  +    E      EV    G +EK +
Sbjct: 252 LATTELDAALRIPEKMARKDARKAVKEKVLEALLADPALAENANLGREVGDMLGSLEKVL 311

Query: 329 VRQQVIDGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIVTTTLGTSRDVQI 388
           VR++++    RIDGRD KTVRPI IE G+LP  HGSALF+RGET+++V  TLG+S D Q 
Sbjct: 312 VRRRILKEGTRIDGRDTKTVRPILIEAGLLPRAHGSALFSRGETKSLVVATLGSSTDSQR 371

Query: 389 IDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPTLEEFPYA 448
           +D+L G+    F+ HYNFPPYSVGE  ++    RRE+GHG LA++ +  V+P  + FP+ 
Sbjct: 372 MDSLVGDVTKKFMLHYNFPPYSVGEV-KMSRVSRREIGHGALAEKALKPVLPQDDSFPFT 430

Query: 449 IRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDKFAVLTDILGD 508
           +R V+E  ESNGSSSMA+VCG SL+LMDAGVP+ APVAG+AMGL+KE  ++ VLTDILGD
Sbjct: 431 LRVVAETMESNGSSSMAAVCGGSLSLMDAGVPVTAPVAGVAMGLIKEEGEYLVLTDILGD 490

Query: 509 EDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMEIALEQAHAARLHILGEMNKVISEP 568
           ED LGDMDFK+AGT EG+TA+QMDIKI G+  ++M  A+ QA  ARLHIL EM KV+  P
Sbjct: 491 EDALGDMDFKIAGTAEGITAVQMDIKITGLPTDVMARAMAQAREARLHILAEMAKVLEAP 550

Query: 569 RAELSARAPSITTIKINPEKIRDVIGKGGSVIRAICDETGASIDLDDDGNVKIYADNQEA 628
           R ELS  AP    + +NP+ IR +IG GG  I+AI   TGASID++D G V I+A   EA
Sbjct: 551 RTELSKYAPQHAEVFVNPDVIRIIIGPGGKNIKAITAATGASIDIEDSGKVSIFAPTYEA 610

Query: 629 AQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISDRRIENVTD 688
            + A   V+      E+G  Y G+V ++++ GA V ILP  + LVHISQ+   R+E   D
Sbjct: 611 MEMAREMVQYYDQRAELGKNYVGKVRKVLEIGAIVEILPNLEALVHISQLDTNRVEQAGD 670

Query: 689 ELSEGQEVLVKVLDVDNRGRVKLSMKEIKEGDQPTDFS 726
               G+++ VKV+++ N  R++ S K +   +Q  +++
Sbjct: 671 VARLGEDMTVKVIEI-NGDRIRASRKAVLLEEQGVEWN 707