Pairwise Alignments

Query, 727 a.a., polynucleotide phosphorylase/polyadenylase from Marinobacter adhaerens HP15

Subject, 699 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Shewanella sp. ANA-3

 Score =  872 bits (2252), Expect = 0.0
 Identities = 452/694 (65%), Positives = 536/694 (77%), Gaps = 6/694 (0%)

Query: 24  LKPFKKSFELGGKTVTLETGRIARQATGSVLVTVDDISVLGTVVGAKEAKPGQPFFPLTV 83
           + P  KSFE G  TVTLETG IARQA  +VL ++ D +VL TVVG KEA+ G+ FFPLTV
Sbjct: 1   MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKEAEAGRDFFPLTV 60

Query: 84  NYFEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGFMNEVQVITTVMSSS 143
           NY EKTYA GKIPGGFFKREGRPSE ETL +RLIDRPIRPLFPNGF NEVQVI TV+S  
Sbjct: 61  NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPNGFTNEVQVIITVVSVD 120

Query: 144 KNQDPDIAAMLAASAALSISGIPFDGPIGASRVGYTNERGYFLNPTFEELQTSLLDMVVA 203
              +PDI +M+  SAAL+ISGIPF GP+GA+RVGY N   Y LNPT  +L++S L++VVA
Sbjct: 121 PQIEPDIISMIGTSAALAISGIPFSGPLGAARVGYINGE-YVLNPTVTQLESSQLNLVVA 179

Query: 204 GTEDAVLMVESEAKGLTEDQMLGGVLYGHQEMQTAVTAIKEFAAEIGKPRWDWQPAAENT 263
           GTE AVLMVESEA+ L E+ MLG V+YGH + Q  + AI EF AE GKP W+W     N 
Sbjct: 180 GTESAVLMVESEAQALPEEVMLGSVVYGHDQQQVVIKAIAEFKAEAGKPAWNWTAPVANE 239

Query: 264 ELLNAIKADFAGAIEEAYGIRDKMARYERLGEVKAAAVEKLAGEEEGQPSED--EVKKYF 321
            L+  +K      + +AY I+ K  RY ++  VKAAA E L       P  D  EV    
Sbjct: 240 ALVAQVKELAEDGLAQAYQIQVKQDRYAQVAVVKAAAKEALLA---ANPDVDLREVDGLL 296

Query: 322 GKIEKSVVRQQVIDGKPRIDGRDNKTVRPIEIEVGVLPSVHGSALFTRGETQAIVTTTLG 381
           G +EK VVR ++I G+PRIDGR+   VR + +  GVLP  HGSALFTRGETQA+VT TLG
Sbjct: 297 GSLEKKVVRGRIIRGEPRIDGREPDMVRALSVLAGVLPRTHGSALFTRGETQALVTCTLG 356

Query: 382 TSRDVQIIDALEGERKDPFLFHYNFPPYSVGEAGRVGTPGRREVGHGRLAKRGVLAVMPT 441
           T RD Q ID++ GER + F+ HYNFPPYSVGE G VG+P RRE+GHG+LA RG+ AVMPT
Sbjct: 357 TERDAQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPT 416

Query: 442 LEEFPYAIRAVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDKFAV 501
            EEFPY++R VSEITESNGSSSMASVCG+SLALMDAGVPIK  VAGIAMGLVKEGD F V
Sbjct: 417 AEEFPYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDNFVV 476

Query: 502 LTDILGDEDHLGDMDFKVAGTQEGVTALQMDIKINGITDEIMEIALEQAHAARLHILGEM 561
           L+DILGDEDHLGDMDFKVAGT++GVTALQMDIKI GIT EIMEIAL+QA+ AR+HIL  M
Sbjct: 477 LSDILGDEDHLGDMDFKVAGTRDGVTALQMDIKIEGITKEIMEIALQQAYGARVHILNVM 536

Query: 562 NKVISEPRAELSARAPSITTIKINPEKIRDVIGKGGSVIRAICDETGASIDLDDDGNVKI 621
           ++ I   R ++S  AP ITTIKINPEKIRDVIGKGG+VIRA+ +ETG +I+L+DDG VKI
Sbjct: 537 DQAIGSHRDDISDHAPRITTIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVKI 596

Query: 622 YADNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISDR 681
            + N +A + A+ R++EIT+E+EVG IY G+V RIVDFGAFVNILPGKDGLVHISQISD 
Sbjct: 597 ASSNGDATREAIRRIEEITSEVEVGRIYNGKVIRIVDFGAFVNILPGKDGLVHISQISDE 656

Query: 682 RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKE 715
           R+ NV+D L   QEV VKV++VD +GRV+LS+KE
Sbjct: 657 RVANVSDHLELNQEVTVKVMEVDRQGRVRLSIKE 690