Pairwise Alignments

Query, 312 a.a., diguanylate cyclase with PAS/PAC sensor from Marinobacter adhaerens HP15

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (356), Expect = 2e-38
 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 1/175 (0%)

Query: 135 ELVALQKKLEEYSYKDGLTGVANRRMFDTVMNENWNHAIRHQSSLSVILLDIDNFKAYND 194
           EL     +LE+ S  DGLT + NRR+FD ++ + W+   R+ + LS+I+LDID+FK +ND
Sbjct: 161 ELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFND 220

Query: 195 LNGHLQGDECLKRIATLLENAAQRPRDFVARFGGEEFVIVLPETDASAAISVAERCRQLL 254
             GHL GD+CLK +A  L  + +R  + VAR+GGEEFVI+LP TD   A+  A+   QL+
Sbjct: 221 HYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLI 280

Query: 255 LEEQIPQGDSPNSKKVTISMGIGTVVPSRDDCIADFLDLVDQRLYKAKRDGRNRI 309
               IP     N   VT+S+G+  ++PS      + +   D  LY AK  GRN I
Sbjct: 281 QSLAIPH-IKTNLGIVTVSVGVACLLPSDKHNALELVHQADTALYLAKSAGRNCI 334