Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 332 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  136 bits (343), Expect = 7e-37
 Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 17/333 (5%)

Query: 14  VAASSTLALVHYLERQGVLNAPRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVTGD 73
           +A+    A +    RQG    P ++QL G++   L +P  R+  +   RL +   L  GD
Sbjct: 6   IASHFARAALGGARRQGFDYVPVLQQL-GISPELLDEPRARIAPEQFARLLQALWLALGD 64

Query: 74  PAVGLHAGKVVD-PERMGLVGHVFFNCDTLGEAVTQYVRLHRLINESVFLSFEQTADQAI 132
             +G   G+    P    ++ H   +C TLG+A+ + +  + L  ++  L+ E   ++  
Sbjct: 65  EYLGF--GRAASKPGTFAMMCHALIHCRTLGKALQRGLLFYSLFPDAPSLTLEAEGERVR 122

Query: 133 LC------WQPDMAEHYCRQDMDRTLAAAITRTRHFIHPGIRAEWVEIAHPAPVYAAEYE 186
           L       W PD   H+  + +   L          I   I  E     +  P + AEY+
Sbjct: 123 LVLDDSTLWDPD---HFLTESL---LVVWHRLASWLIGQRIGLEQATFGYTKPAHGAEYD 176

Query: 187 KLLGGPVRFDCGITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNTLLARLQSRRSFGRRIR 246
            L   P+ F+   + L F+SR+LG P+ +    +   + +    LL+R     S   ++R
Sbjct: 177 LLFSCPLVFEARSSSLLFHSRYLGMPLLQDERTLKHFLERSPADLLSRPDDGHSLSSQLR 236

Query: 247 RLISKQMATERIDADSLARQCHMSRQTLYRKLKKEGLSFHGLVEQVRQDKALRYVAADQY 306
           RL+S+  A    D D++A   H+S QTL R L++EG SF  L +Q+R+D A+ ++     
Sbjct: 237 RLLSRDTARWP-DLDTVAGHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADL 295

Query: 307 ALGEIAFLLGFSELSAFSRAFKRWTGTSPAEYR 339
           +L +IA  LGFSE SAF RAFK+WTG +P  YR
Sbjct: 296 SLQQIAEQLGFSEPSAFHRAFKKWTGLTPGAYR 328