Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 334 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (327), Expect = 5e-35
 Identities = 92/329 (27%), Positives = 155/329 (47%), Gaps = 3/329 (0%)

Query: 12  PLVAASSTLALVHYLERQGVLNAPRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVT 71
           P   AS T AL   L+  G L++  +    GL    + DP+ R P  A  RLW  A   +
Sbjct: 4   PTSLASWTRALRKQLDALG-LDSHALCVEAGLDPQWMDDPNARYPLSATTRLWTLAVQAS 62

Query: 72  GDPAVGLHAGKVVDPERMGLVGHVFFNCDTLGEAVTQYVRLHRLINESVFLSFEQTADQA 131
           GDPA+GL   + V P     +G+      +L E   + VR H ++++++ L   +  D+ 
Sbjct: 63  GDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERIVRYHPVVSDALTLQLIRAEDRY 122

Query: 132 ILCWQ-PDMAEHYCRQDMDRTLAAAITRTRHFIHPGIRAEWVEIAHPAPVYAAEYEKLLG 190
               + P        + +D   A  +   R+ +        V +  P P   + + K+  
Sbjct: 123 RFSLEVPPDRPAPAFEAIDAFAAIYVRTCRNRLGRDYAPLAVYLRRPEPADPSPWHKVFR 182

Query: 191 GPVRFDCGITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNTLLARLQSRRSFGRRIRRLIS 250
            PV F      L FN       +   NP +       +   LA+L+   ++ R++R  I 
Sbjct: 183 SPVHFGAAQDCLEFNLTDFDSHLDDANPELAEHNETVLERTLAQLKPL-TWERKVRAAIE 241

Query: 251 KQMATERIDADSLARQCHMSRQTLYRKLKKEGLSFHGLVEQVRQDKALRYVAADQYALGE 310
            Q+      A+ +A+  H+S ++L R L  EG  F  L+ + R++ AL ++     +L E
Sbjct: 242 AQLPEGEPSAERIAQAMHLSLRSLQRHLADEGCRFDALLNECRENLALLHLRDPNCSLSE 301

Query: 311 IAFLLGFSELSAFSRAFKRWTGTSPAEYR 339
           +++LLGF++ S+FSRAFKRWTG +P ++R
Sbjct: 302 VSYLLGFADASSFSRAFKRWTGMTPGQFR 330