Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (310), Expect = 5e-33
 Identities = 95/314 (30%), Positives = 140/314 (44%), Gaps = 5/314 (1%)

Query: 35  PRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVTGDPAVGLHAGKVVDPERMGLVGH 94
           P +EQ  GL  + L +P  R+    + RL   A   T DPA+GL  G++    + GL G 
Sbjct: 27  PLLEQY-GLDAARLAEPGARLSIPRYMRLGHAAIQQTQDPALGLRMGQLGRLSQAGLAGV 85

Query: 95  VFFNCDTLGEAVTQYVRLHRLINESVF--LSFEQTADQAIL-CWQPDMAEHYCRQDMDRT 151
                 T+ EA    +R   L   +     SF + A  A L  +       Y R  +D  
Sbjct: 86  TAAQAPTVREAARCMIRFEPLYGSNYRGQSSFHEDARGAWLRFYSISPYNAYNRFVVDSI 145

Query: 152 LAAAITRTRHFIHPGIRAEWVEIAHPAPVYAAEYEKLLGGPVRFDCGITRLAFNSRHLGH 211
           +A  + +        +R E +EI    P Y   Y  L   PV+F     +L      L  
Sbjct: 146 IAGWLAQLSSVSGIALRPERIEIEFEEPAYVEAYRTLGDCPVQFGAEQNQLRLGLDSLAQ 205

Query: 212 PIPRRNPYVYSAVLKQVNTLLARLQSRRSFGRRIRRLISKQMATERI-DADSLARQCHMS 270
             P+  P  +  +L+     L +L   RS   RI +L+   +   R  D + +A +  + 
Sbjct: 206 RNPQHCPSTWHHLLQLCERELEQLTRTRSLRERIIQLLGPLLNGGREPDLEEVAARLKLP 265

Query: 271 RQTLYRKLKKEGLSFHGLVEQVRQDKALRYVAADQYALGEIAFLLGFSELSAFSRAFKRW 330
             TL RKL +EG  F  ++   R+D A+ Y+   + A GEIA+LLGF+   AF RAFKRW
Sbjct: 266 TWTLRRKLAEEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAEAFQRAFKRW 325

Query: 331 TGTSPAEYRARHLG 344
              +P E+R  H G
Sbjct: 326 NNQTPGEFRRSHRG 339