Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 342 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  153 bits (386), Expect = 7e-42
 Identities = 102/324 (31%), Positives = 163/324 (50%), Gaps = 5/324 (1%)

Query: 20  LALVHYLERQGVLNAPRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVTGDPAVGLH 79
           + +V  LE  G+      +QL GL  + L DPD R P D+  RLW+ A  ++G+PA+GL+
Sbjct: 1   MGIVKALEMDGLDCRVLFKQL-GLDYAALDDPDARFPQDSMTRLWQRAVELSGNPAIGLN 59

Query: 80  AGKVVDPERMGLVGHVFFNCDTLGEAVTQYVRLHRLINESVFLSFEQTADQAILCWQPDM 139
            GKVV P    + G+   +  TL E   + VR  R+I ES  LSF +  D+         
Sbjct: 60  MGKVVRPASFHVAGYALMSSQTLAEGFQRLVRYQRIIAESADLSF-RLLDEGYALILTVH 118

Query: 140 AEHY--CRQDMDRTLAAAITRTRHFIHPGIRAEWVEIAHPAPVYAAEYEKLLGGPVRFDC 197
            +H    RQ  + +LA A+          ++   V +    PV    Y++    P+ F+ 
Sbjct: 119 GDHLPPTRQSAEASLACALALCGWLTGRTLQPRKVLLQGDNPVDLEPYKQAFHAPLMFNA 178

Query: 198 GITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNTLLARLQSRRSFGRRIRRLISKQMATER 257
               L F    +  P+P  N  +     +     LAR    R    + R+++ + +    
Sbjct: 179 PYDALIFERADMEAPLPTANEAMARLHDRFAGEYLARFSESR-VTHKARQVLCRLLPQGE 237

Query: 258 IDADSLARQCHMSRQTLYRKLKKEGLSFHGLVEQVRQDKALRYVAADQYALGEIAFLLGF 317
              D++A+  H+S++TL R+L++EG SF  L++  R++ A +Y+A     L EIA+LLGF
Sbjct: 238 PKRDTVAQTLHLSQRTLQRRLQEEGTSFQTLLDDTRRELAEQYLAQPNMTLLEIAYLLGF 297

Query: 318 SELSAFSRAFKRWTGTSPAEYRAR 341
           ++ S F RAF+RW  ++P EYR R
Sbjct: 298 ADPSNFFRAFRRWFDSTPGEYRTR 321