Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 337 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  121 bits (303), Expect = 3e-32
 Identities = 97/339 (28%), Positives = 161/339 (47%), Gaps = 20/339 (5%)

Query: 14  VAASSTLALVHYLERQGVLNAPRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVTGD 73
           +A+    A +    R+G   +  ++QL G++   L +P  R+  +   RL +   L   D
Sbjct: 6   IASHFARAALGGARRRGYDYSSLLQQL-GISPELLEEPRARIAPEQFARLIQGLWLALDD 64

Query: 74  PAVGLHAGKVVDPERMGLVGHVFFNCDTLGEAVTQYVRLHRLINESVFLSFEQTADQAIL 133
             +G        P    ++ H   +C TL +A+ + +  + L   +  L+  +  +   L
Sbjct: 65  EYLGFGQAPS-KPGSFAMMCHAVIHCRTLEKALNRGLLFYSLFPGAPRLTLSREGEMVRL 123

Query: 134 C------WQPDMAEHYCRQDMDRTLAAAITRTRHFIHPGIRAEWVEIAHPAPVYAAEYEK 187
           C      W PD   H+  + +   L          I   IR E    ++P P + AEY+ 
Sbjct: 124 CLDDSPLWDPD---HFLSESL---LVIWHRFGSWLIGQRIRLEQATFSYPRPEHGAEYDL 177

Query: 188 LLGGPVRFDC-----GITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNTLLARLQSRRSFG 242
           L   P+ F         + L F+SR+L  P+ +    +   + +    LL+R     S  
Sbjct: 178 LFSCPLSFSTVKSTTSQSSLLFHSRYLNMPLLQDERTLKHFLERSPADLLSRPDEGDSLS 237

Query: 243 RRIRRLISKQMATERIDADSLARQCHMSRQTLYRKLKKEGLSFHGLVEQVRQDKALRYVA 302
            ++RRL+S+  A    D +++A   H+S QTL R L++EG SF  L +Q+R+D A+ ++ 
Sbjct: 238 SQLRRLLSRDNARWP-DLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLG 296

Query: 303 ADQYALGEIAFLLGFSELSAFSRAFKRWTGTSPAEYRAR 341
               +L +IA  LGFSE SAF RAFK+WTG +P  YRA+
Sbjct: 297 RADLSLQQIAEQLGFSEPSAFHRAFKKWTGLTPGAYRAQ 335