Pairwise Alignments

Query, 358 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

Subject, 334 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

 Score =  132 bits (333), Expect = 1e-35
 Identities = 95/329 (28%), Positives = 157/329 (47%), Gaps = 3/329 (0%)

Query: 12  PLVAASSTLALVHYLERQGVLNAPRVEQLTGLAMSELTDPDRRVPADAHYRLWEHAELVT 71
           P   AS T AL   L+  G L++  + Q  GL    + DP+ R P     RLW  A  V+
Sbjct: 4   PTSLASWTRALRKQLDALG-LDSTALCQQAGLDPQLMDDPNARYPLSGTTRLWHIAVQVS 62

Query: 72  GDPAVGLHAGKVVDPERMGLVGHVFFNCDTLGEAVTQYVRLHRLINESVFLSFEQTADQA 131
           GDPA+GL   + V P     +G+      +L E   + VR H++++ ++ L   +  D+ 
Sbjct: 63  GDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERIVRYHQVVSNALDLELIRAEDRY 122

Query: 132 ILCWQPDMAEHYCRQDMDRTLAAAITRT-RHFIHPGIRAEWVEIAHPAPVYAAEYEKLLG 190
               +          +     AA   RT R+ +        V +  P P    ++ K+  
Sbjct: 123 YFRLKIPQGNPAPAFEAIDAFAAIYVRTCRNRLGRDYAPLAVYLRRPEPADPHQWHKVFR 182

Query: 191 GPVRFDCGITRLAFNSRHLGHPIPRRNPYVYSAVLKQVNTLLARLQSRRSFGRRIRRLIS 250
            PV F     RL F        +   NP +       +   LA+L+   ++ R++R  I 
Sbjct: 183 SPVYFAADEDRLEFALVDFDSHLDDANPELAEHNETVLKRTLAQLKPL-TWERKVRDAIE 241

Query: 251 KQMATERIDADSLARQCHMSRQTLYRKLKKEGLSFHGLVEQVRQDKALRYVAADQYALGE 310
           +Q+      A+ +A+  H+S ++L R L  EG  F  L+ + R++ AL ++   Q +L E
Sbjct: 242 EQLPEGEPSAECIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLSE 301

Query: 311 IAFLLGFSELSAFSRAFKRWTGTSPAEYR 339
           +++LLGF++ S+FSRAFKRWTG +P ++R
Sbjct: 302 VSYLLGFADTSSFSRAFKRWTGMTPGQFR 330