Pairwise Alignments

Query, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

Subject, 296 a.a., integrase/recombinase XerC (RefSeq) from Shewanella amazonensis SB2B

 Score =  298 bits (764), Expect = 8e-86
 Identities = 159/290 (54%), Positives = 204/290 (70%), Gaps = 4/290 (1%)

Query: 9   LAEFIRHLASEKRHSPRTCDSYHRDLLRLADWLGRSGFVAWQRVTNHDLRRYVATLSREG 68
           L  F R+LA+E++ SP T  +Y  +L R    LG+    +WQ+++  DL   +A L R+G
Sbjct: 8   LERFTRYLATERQLSPMTVRNYRFELERADTLLGQR---SWQQLSRQDLSGLMARLHRQG 64

Query: 69  LSGRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDGQP 128
           LS RS++   SA ++F QFLL+E L   NPA  + APK  + LP+  D D +NHLLD  P
Sbjct: 65  LSPRSLSLTASALKQFGQFLLKEGLIDTNPAATLSAPKQSKTLPKNLDPDSVNHLLDIPP 124

Query: 129 DDPLEVRDLCMFELMYSSGLRLAELASLDLDTVDVRSGEVRVMGKGGKERLLPVGRKAIA 188
           +D L +RD  + EL YS GLRLAELA+LD+  +D  S EVRV+GKG KER+LPVG  A+A
Sbjct: 125 EDGLALRDKAIMELFYSCGLRLAELAALDVKDLDRESREVRVIGKGSKERILPVGSVALA 184

Query: 189 AIQAWVPYRAALANDGEAALFVSQRGERLSHRSIQARLSRWGISRGADQKLHPHLLRHSF 248
           AI  W+  R  +    + ALFVS RG RLSHRSIQAR+ +W   +G    +HPH LRHSF
Sbjct: 185 AIGDWLKVRNQMPCQDD-ALFVSSRGSRLSHRSIQARMEKWAQIQGLSVGVHPHKLRHSF 243

Query: 249 ASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHPRARR 298
           A+HMLESSGDLRAVQELLGHA++ATTQ+YT LDFQHLA+VYD +HPRAR+
Sbjct: 244 ATHMLESSGDLRAVQELLGHANLATTQIYTSLDFQHLAKVYDGAHPRARK 293