Pairwise Alignments

Query, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

Subject, 297 a.a., tyrosine recombinase XerC (RefSeq) from Shewanella loihica PV-4

 Score =  284 bits (726), Expect = 2e-81
 Identities = 150/290 (51%), Positives = 208/290 (71%), Gaps = 7/290 (2%)

Query: 11  EFIRHLASEKRHSPRTCDSYHRDLLRLADWLGRSGFVAWQRVTNHDLRRYVATLSREGLS 70
           EF+ +L SE++ SP T  +Y  +L R+ + L  +    W  V++  L+  +  L R+GL 
Sbjct: 8   EFVSYLVSERQLSPHTVRNYRFELERVGELLPEN--FIWAEVSDEQLQAVLNKLHRKGLG 65

Query: 71  GRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDGQPDD 130
            RSIA  LSA ++F  +LL+E     +P L++ APK  + LP+  D+D + HLL  + DD
Sbjct: 66  PRSIALTLSALKQFCHYLLQEGYIKKDPCLNLSAPKQQKPLPKNMDLDSVTHLLSIEGDD 125

Query: 131 PLEVRDLCMFELMYSSGLRLAELASLDLDTVDVRSGE--VRVMGKGGKERLLPVGRKAIA 188
            L +RD  + EL YSSGLRLAELA+LD  T D+ SGE  V+VMGKG KER++P+GR A++
Sbjct: 126 ALALRDKAIMELFYSSGLRLAELAALD--TRDIASGEHQVKVMGKGSKERIVPIGRMALS 183

Query: 189 AIQAWVPYRAALANDGEAALFVSQRGERLSHRSIQARLSRWGISRGADQKLHPHLLRHSF 248
           AI  W+  R+ L  + +A LFV+ +G+RL+HRSIQARL++WG  +G + ++HPH LRHSF
Sbjct: 184 AIDDWLKVRSLLPCEDDA-LFVTAKGKRLAHRSIQARLNKWGQLQGLNARVHPHKLRHSF 242

Query: 249 ASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHPRARR 298
           A+HMLESS DLRAVQELLGHA+++TTQVYT LDFQHLA+VYD +HPRA++
Sbjct: 243 ATHMLESSADLRAVQELLGHANLSTTQVYTSLDFQHLAKVYDGAHPRAKK 292