Pairwise Alignments

Query, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Klebsiella michiganensis M5al

 Score =  211 bits (537), Expect = 2e-59
 Identities = 112/292 (38%), Positives = 180/292 (61%), Gaps = 5/292 (1%)

Query: 9   LAEFIRHLASEKRHSPRTCDSYHRDLLRLADWLGRSGFVAWQRVTNHDLRRYVATLSREG 68
           + +F+  L  E+  +  T  +Y RDL  + +WL   G ++   V+  DL+  +A     G
Sbjct: 8   IEQFLDALWLERNLAENTLSAYRRDLTMVVEWLHHRG-LSLASVSGEDLQSLLAERQTGG 66

Query: 69  LSGRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDGQ- 127
               S AR LSA RRF+Q L REK+  D+P+  + +PK  +RLP+     Q+  LL    
Sbjct: 67  YKATSTARLLSAVRRFFQHLYREKIRPDDPSALLASPKLPQRLPKDLSEAQVERLLQAPL 126

Query: 128 PDDPLEVRDLCMFELMYSSGLRLAELASLDLDTVDVRSGEVRVMGKGGKERLLPVGRKAI 187
            + PLE+RD  M E++Y++GLR++EL  L +  + +R G +RV+GKG KERL+P+G +A+
Sbjct: 127 VEQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVLRVIGKGNKERLVPLGEEAV 186

Query: 188 AAIQAWVPYRAALANDGEAA--LFVSQRGERLSHRSIQARLSRWGISRGAD-QKLHPHLL 244
             ++ ++ Y      +G A+  LF SQR ++++ ++   R+  + +  G D +KL PH+L
Sbjct: 187 LWVENYLEYGRPWLLNGVASDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVL 246

Query: 245 RHSFASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHPRA 296
           RH+FA+H+L    DLR VQ LLGH+D++TTQ+YTH+  + L +++ Q HPRA
Sbjct: 247 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298