Pairwise Alignments

Query, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

Subject, 307 a.a., tyrosine recombinase XerC from Burkholderia phytofirmans PsJN

 Score =  231 bits (590), Expect = 1e-65
 Identities = 134/304 (44%), Positives = 177/304 (58%), Gaps = 17/304 (5%)

Query: 8   PLAEFIRHLASEKRHSPRTCDSYHRDLLRLADWL-GRSGFVAWQRVTNHDLRRYVATLSR 66
           P+A ++ +L  E+R S  T   Y  +L  L     GR      + +T  D+R  V+    
Sbjct: 6   PIAAYLSNLEHERRLSAHTLRGYAHELEELKQLAKGRP----LESLTPVDIRGAVSRAHA 61

Query: 67  EGLSGRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDG 126
            GL+ RSI+  LSA R FY++L      + NP   +RAPK  + LP+   VD    L++ 
Sbjct: 62  GGLTARSISHRLSAWRAFYRWLAGRVDLAANPVATVRAPKQAKPLPKALSVDDATRLMES 121

Query: 127 QPD-DPLEVRDLCMFELMYSSGLRLAELASLDLDTVD-----------VRSGEVRVMGKG 174
            P   P  +RD  M EL YSSGLRLAEL  LD    D           + S EV V+GKG
Sbjct: 122 PPAASPEGLRDHAMLELFYSSGLRLAELVGLDARFADADGYRSAGWLKLDSAEVEVLGKG 181

Query: 175 GKERLLPVGRKAIAAIQAWVPYRAALANDGEAALFVSQRGERLSHRSIQARLSRWGISRG 234
            + R++PVG KA+ A+ AW+  R  +       LF+S RG RLS   ++ R+ R  +  G
Sbjct: 182 NRRRVVPVGSKALEALGAWLAVRDQMVKHDPHPLFLSARGNRLSPNVVRERVKRAALVAG 241

Query: 235 ADQKLHPHLLRHSFASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHP 294
               +HPH+LRHSFA+H+L+SSGDLRAVQELLGHA I  TQVYT LDFQHLA VYDQ+HP
Sbjct: 242 IPANVHPHVLRHSFATHVLQSSGDLRAVQELLGHASITATQVYTALDFQHLAHVYDQAHP 301

Query: 295 RARR 298
           RA++
Sbjct: 302 RAKK 305