Pairwise Alignments

Query, 686 a.a., sensory box sensor/GGDEF/EAL domain protein from Marinobacter adhaerens HP15

Subject, 680 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  400 bits (1029), Expect = e-116
 Identities = 237/672 (35%), Positives = 373/672 (55%), Gaps = 25/672 (3%)

Query: 13  YRILRW-----ILAVALASGVVVSAIQVILDAQRVSRGLDSDAKQTIAMVKDAATQAVFS 67
           ++ L W     ++  AL   V +  I++ L        L S  ++ +  V+  A  AV++
Sbjct: 5   FKSLTWKQTNLVVFTALFFAVAIFIIELALMVMSTREALTSSQQELLDSVEQPAANAVWA 64

Query: 68  IDAELAQQVVDGLFAKEAVHMARIVHPDGDPLGD--RSRPLQETAFRPVTDPIFDADRLY 125
           +D  LA+Q ++G+   E V  + I   DG         +      F  +++ +F   R  
Sbjct: 65  LDDNLARQTLEGVLKVEHVGASVIELDDGSMFVSVTNGKNTYSNFFNSLSEELFGDLREI 124

Query: 126 REPLFR----EGN-PEDVYGFLDVHYDTAAAARTWLDRAAVTFASGMATALILGMVLFYV 180
             PL+R    EG+  + + G L + YDT   A T   +  V F + +A AL L +VL  V
Sbjct: 125 SRPLYRPFYFEGSRQQQLIGSLTIFYDTQELANTLFGQLKVGFLATLARALFLTLVLSIV 184

Query: 181 FHLLLTRPLLRIVNSVRQVDPAHPDDRLVTTPSGHQSDELGLWVNATNNLLVAIGDSQKR 240
           FH  LT+P+ RI  ++ +++P  PD+ L+     H+ DELGL     N +L+  G +Q +
Sbjct: 185 FHRFLTQPIARISEAIDKIEPESPDENLLPISDAHKDDELGLVSTKLNQILLQFGQTQSK 244

Query: 241 HREAEDRVSRLSRYDQLTGLPSRDTFMELLVRDIEDAARRNAQLSLIVCGIDDFKSVNEQ 300
            R+   R       D LTGLP+R   +E +   I+ A       +L+   +D FK+VN+ 
Sbjct: 245 LRKMATR-------DPLTGLPNRTLLLETIAVTIQRARVHKRSFTLLFIDLDRFKNVNDS 297

Query: 301 CGFRSGDLILQTVADRLTNKLDNARFTIARLGSDQFVVVQKGLRDGFQAADTAERILACV 360
            G   GD  L  +A RL  ++   + T+ARLG D+FV++   +     AAD  +++L  +
Sbjct: 298 LGHALGDQFLARIA-RLLERVVGDKGTVARLGGDEFVILADEIHCADMAADFVDKLLVQL 356

Query: 361 NEPMLVEDQNISISATLGVALYPSDTSKADRLLQSAEQTMTLAKQNGHNHFQFYVASIDQ 420
           N P+ + D +I  +A++G++LYP D + A+ L++ A+  M  AK +G N + F+   + +
Sbjct: 357 NNPIQLGDHSIHPAASVGISLYPEDGNSAEDLIRHADIAMYSAKASGSNQWAFFKQQMTE 416

Query: 421 EIRDRKQLEKDLSQALGNHQFHLVYQPQINLESKRVIGAEALLRWEHPTRGTVPPDFFIP 480
               R + E  L  AL N +F L +QP+++L + +V+G EAL+RW+   R  + P  FIP
Sbjct: 417 RAAVRLRTEASLHDALKNDEFVLHFQPKLDLTTGKVMGCEALIRWQKDGR-LISPMSFIP 475

Query: 481 VAEANGSIVEIGQWVLDQACWQAARWASD-GSPLRIAVNLSAVQLRQESIVDDILDTLRR 539
           VAE  G IV IG+WVL+Q+C     W       + IAVN+++ Q    S+V DI     R
Sbjct: 476 VAEETGIIVPIGRWVLEQSCKTLRHWQKQYNFAIPIAVNVASQQFADASLVPDIKQMALR 535

Query: 540 HKIPAGRLELEVTETSFMTNLSDAVAKLHRLNKAGISIAVDDFGTGYSSLTYLKQMPVQH 599
           ++I    LE+E+TETS M+++  A++KL +L  AG  IAVDDFGTGYSSL+YL+ +P+  
Sbjct: 536 YQISPDLLEIEITETSLMSDVETAISKLEQLKNAGFGIAVDDFGTGYSSLSYLRHLPITT 595

Query: 600 LKIDKQFIRDLLVNEEDTRIANTIIDLGKSLNLSVVAEGVETAEQEYYLSQRGCKLAQGY 659
           +KID+ F+ DL     D+ IA+TI+ LGK L+L +VAEG+E  +Q  +L   GC + QG+
Sbjct: 596 MKIDRCFVTDL---PNDSAIASTILMLGKQLDLRIVAEGIENEQQLQWLKTAGCGIGQGF 652

Query: 660 FFSKPLPPREFE 671
           +FS PLP  EFE
Sbjct: 653 YFSPPLPMEEFE 664