Pairwise Alignments

Query, 686 a.a., sensory box sensor/GGDEF/EAL domain protein from Marinobacter adhaerens HP15

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  323 bits (829), Expect = 2e-92
 Identities = 180/445 (40%), Positives = 264/445 (59%), Gaps = 3/445 (0%)

Query: 232 VAIGDSQKRHREAEDRVSRLSRYDQLTGLPSRDTFMELLVRDIEDAARRNAQLSLIVCGI 291
           VA+       +++E  ++RL  +D LT LP+R      L +++  AAR   +L+LI   +
Sbjct: 393 VAVFADISAQKQSEKELARLVYHDPLTKLPNRMMLSANLEQELRHAAREETELALIFIDV 452

Query: 292 DDFKSVNEQCGFRSGDLILQTVADRLTNKLDNARFTIARLGSDQFVVVQKGLRDGFQAAD 351
           D FK +N+  G  +GD IL  VA RL  KL     T+ARLGSD+F+ V   +      + 
Sbjct: 453 DLFKHINDSYGHVTGDAILVEVARRLGQKLGEEA-TLARLGSDEFIAVLPHVESDDSVSL 511

Query: 352 TAERILACVNEPMLVEDQ-NISISATLGVALYPSDTSKADRLLQSAEQTMTLAKQNGHNH 410
              R+    + P L++D+ ++ ++A++GVA+YP D    D LL++A+  M  AK NG N+
Sbjct: 512 MVSRLREAFDAPFLLDDEGSVRLTASMGVAIYPGDGESGDTLLRNADTAMHRAKANGRNN 571

Query: 411 FQFYVASIDQEIRDRKQLEKDLSQALGNHQFHLVYQPQINLESKRVIGAEALLRWEHPTR 470
           + FY  S+     +  +L+  L  A+    F+LVYQP++ L + + +G EALLRWE P  
Sbjct: 572 YAFYTQSLTLASVEHLKLQSALHDAINKDAFYLVYQPKLALGTGQCVGFEALLRWEDPQL 631

Query: 471 GTVPPDFFIPVAEANGSIVEIGQWVLDQACWQAARWASDGSPL-RIAVNLSAVQLRQESI 529
           GT+ P  FIPVAE  G I EIG WVL QA  Q A+W ++G    RI+VN++  QL+Q+  
Sbjct: 632 GTISPAIFIPVAENIGLINEIGLWVLKQAATQGAQWLAEGKRFGRISVNVAGPQLQQKQF 691

Query: 530 VDDILDTLRRHKIPAGRLELEVTETSFMTNLSDAVAKLHRLNKAGISIAVDDFGTGYSSL 589
              +   L    +P   LELEVTE+  M++    +  L +L + G+ ++VDDFGTGYSSL
Sbjct: 692 CAQVKRVLDEAGLPPEYLELEVTESCMMSDPLAVIEVLKQLGELGVELSVDDFGTGYSSL 751

Query: 590 TYLKQMPVQHLKIDKQFIRDLLVNEEDTRIANTIIDLGKSLNLSVVAEGVETAEQEYYLS 649
            YLK++P+  LKID+ FIRD+  +  +T IA  +I LG +LNL ++AEGVET EQ  +L 
Sbjct: 752 NYLKRLPIHKLKIDQSFIRDIPRDGNNTAIAKAVIALGHALNLCIIAEGVETPEQAAFLE 811

Query: 650 QRGCKLAQGYFFSKPLPPREFETFV 674
             GC  AQGY +SKP    E   F+
Sbjct: 812 AAGCDQAQGYLYSKPRMVEELAEFL 836



 Score = 25.8 bits (55), Expect = 0.009
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 9/74 (12%)

Query: 398 QTMTLAKQNGHNHFQFYVASIDQEIRDRKQLEKDLSQALGNHQFHLVY-QPQINLESKRV 456
           + +T++   G +H   Y  ++  +I  +KQ EK+L++        LVY  P   L ++ +
Sbjct: 375 EQLTISSMYGDDHQVRYFVAVFADISAQKQSEKELAR--------LVYHDPLTKLPNRMM 426

Query: 457 IGAEALLRWEHPTR 470
           + A       H  R
Sbjct: 427 LSANLEQELRHAAR 440