Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM-like protein from Marinobacter adhaerens HP15

Subject, 349 a.a., flagellar motor switch protein FliM from Vibrio cholerae E7946 ATCC 55056

 Score =  386 bits (991), Expect = e-112
 Identities = 190/327 (58%), Positives = 252/327 (77%), Gaps = 4/327 (1%)

Query: 1   MQDLLSQDEIDALLHGVDDGDIDTYEETDDTG--IKSYDLASQDRIVRGRMPTLEMINER 58
           M DLLSQDEIDALLHGVD  D +  EE   +G    ++D +SQDRIVRGRMPTLE+INER
Sbjct: 1   MTDLLSQDEIDALLHGVDSVD-EEEEELPKSGPSATNFDFSSQDRIVRGRMPTLELINER 59

Query: 59  FARYTRISLFNLMRRNADVSTGGVQIMKFGEYIHTLYVPTSLNLCKVRPLRGTSLFVLDA 118
           FAR+ RISLFN++R+ A+VS  GVQ+MKFGEY +TLYVPTSLN+ + RPL+GT+L  ++A
Sbjct: 60  FARHLRISLFNMLRKTAEVSINGVQMMKFGEYQNTLYVPTSLNMVRFRPLKGTALVTMEA 119

Query: 119 KLVFKLVDNFFGGEGR-HAKIEGREFTPTETRIVQMVLDQVFHDMKEAWHAVLKVDFEYL 177
           +LVF LV+NFFGG+GR HA+IEGREFTPTE R++Q++L  VF D KEAW  V+ V+FEYL
Sbjct: 120 RLVFILVENFFGGDGRYHARIEGREFTPTERRVIQLLLKIVFADYKEAWSPVMGVEFEYL 179

Query: 178 SSEVNPAMANIVSPSEVVVVSTFHIELDGGGGELHFALPYSMIEPIRDVLDAGVQSDIDD 237
            SEVNP+MANIVSP+EV+VVS+FH+E+DGGGG+ H  +PYSM+EPIR++LDAGVQSD  +
Sbjct: 180 DSEVNPSMANIVSPTEVIVVSSFHVEVDGGGGDFHMVMPYSMVEPIRELLDAGVQSDKME 239

Query: 238 VDERWVNALQEDIKEVSVPINTTVCRRRISLRDIAKMKAGDIIPVEIPEHLTVTANGIPI 297
            D RW  AL+E+I +V V     +    I+LRD+ +++ GD+IP+++PEH  +    +P 
Sbjct: 240 TDVRWSTALREEIMDVPVNFRVNLLEMDIALRDLMELQVGDVIPIKMPEHAVMFVEELPT 299

Query: 298 YKATLGTRDGKLALRIHERASVPKVKK 324
           Y+  +G    KLA+++ E+   P V K
Sbjct: 300 YRVKMGRSGEKLAVQVSEKIKRPDVVK 326