Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM-like protein from Marinobacter adhaerens HP15

Subject, 384 a.a., flagellar motor switch protein FliM (NCBI) from Rhodospirillum rubrum S1H

 Score =  136 bits (343), Expect = 7e-37
 Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 13/321 (4%)

Query: 4   LLSQDEIDALLHGVDDGDIDTYEETDDTGIKSYDLASQDRIVRGRMPTLEMINERFARYT 63
           +L+QDEID+LL   +  D      TD +GI++  + S   +   R+P LE++ +R  R  
Sbjct: 68  VLNQDEIDSLLGFSEAED----SGTDKSGIQA--IISTALVSYERLPMLEVVFDRLVRMM 121

Query: 64  RISLFNLMRRNADVSTGGVQIMKFGEYIHTLYVPTSLNLCKVRPLRGTSLFVLDAKLVFK 123
             SL N    N +VS   +Q  +FG+Y++++ +P  L++ K        L  +D+ +++ 
Sbjct: 122 STSLRNFTSDNVEVSLDNIQSYRFGDYLNSIPLPAMLSVFKAEEWDNYGLLTIDSSMIYS 181

Query: 124 LVDNFFGGEGRHA--KIEGREFTPTETRIVQMVLDQVFHDMKEAWHAVLKVDFEYLSSEV 181
           +VD   GG    A  +IEGR +T  E  +V+ ++  V  D+  A+  +  V F +   E 
Sbjct: 182 IVDVLLGGRRGTAAMRIEGRPYTTIERNLVERLVHVVLADLSAAFDPLSPVTFRFDRLET 241

Query: 182 NPAMANIVSPSEVVVVSTFHIELDGGGGELHFALPYSMIEPIRDVLDAGVQSDIDDVDER 241
           NP  A I  PS   +V+   I+++  GG L   +PY+ +EP+R++L      +    D  
Sbjct: 242 NPRFATISRPSNAAIVAKLRIDMEDRGGRLDMLIPYATLEPVRELLLQMFMGEKFGRDSI 301

Query: 242 WVNALQEDIKEVSVPINTTVCRRRISLRDIAKMKAGDIIPVEIPEHLTV--TANGIPIYK 299
           W   L E++    V ++  +    + L  I  M+ G  I        TV      +P++ 
Sbjct: 302 WETHLAEEMWSTEVQMDAILDEVYMPLNKILSMEVGSQILFNATPDSTVQLRCGDVPMFD 361

Query: 300 ATLGTRDGKLALRI---HERA 317
             +G +   +A+R+   H RA
Sbjct: 362 GKMGRKGQNIAIRVDSKHNRA 382