Pairwise Alignments

Query, 332 a.a., flagellar motor switch protein FliM-like protein from Marinobacter adhaerens HP15

Subject, 326 a.a., flagellar motor switch protein FliM (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  250 bits (638), Expect = 4e-71
 Identities = 132/317 (41%), Positives = 197/317 (62%), Gaps = 4/317 (1%)

Query: 1   MQDLLSQDEIDALLHGVDDGDIDTYEET--DDTGIKSYDLASQDRIVRGRMPTLEMINER 58
           M  +L+QDE+DALL G+  G+I++  +   DD+GI  +DLA+QDRI+RGRMP LE++N+R
Sbjct: 1   MNKILAQDEVDALLRGLSGGEIESETDIQHDDSGIVPFDLANQDRIIRGRMPVLEIVNDR 60

Query: 59  FARYTRISLFNLMRRNADVSTGGVQIMKFGEYIHTLYVPTSLNLCKVRPLRGTSLFVLDA 118
           FAR    +L N +R+  +++   + + KFG+++ +L VPTS+N+ K+ PLRG ++ V+D+
Sbjct: 61  FARLCTNALSNAVRKRVELNPISIDMTKFGDFMRSLPVPTSINIFKMEPLRGNAIIVVDS 120

Query: 119 KLVFKLVDNFFGGEGRHAKIEGREFTPTETRIVQMVLDQVFHDMKEAWHAVLKVDFEYLS 178
           +LVF LV+NFFGG G   KIEGREFT  E  IV  V+     +M+E+W  V  V  E + 
Sbjct: 121 RLVFALVENFFGGSGSQPKIEGREFTRIEQAIVDRVIHIALDNMEESWRPVHDVHLELVR 180

Query: 179 SEVNPAMANIVSPSEVVVVSTFHIELDGGGGELHFALPYSMIEPIRDVLDAGVQSDIDDV 238
           SE+NP  A IV PS+VVVV TF +ELD   G +   LPY+ IEPIR  L A  Q++  +V
Sbjct: 181 SEINPQFAAIVPPSDVVVVITFEVELDSAIGSMVICLPYATIEPIRSKLHASFQTERLEV 240

Query: 239 DERWVNALQEDIKEVSVPINTTVCRRRISLRDIAKMKAGDI--IPVEIPEHLTVTANGIP 296
           D  WV  L+E + E  V +       +I+   + +++ GD+  +  +  + L VT  G+ 
Sbjct: 241 DHAWVARLKERLMETPVELKVRFGETKITGNQLLRLQVGDVLLLDTDTDDMLEVTIAGVT 300

Query: 297 IYKATLGTRDGKLALRI 313
            +    GT     A +I
Sbjct: 301 KFWGLGGTVKANKAFQI 317