Pairwise Alignments

Query, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

Subject, 621 a.a., Transcriptional activator of acetoin dehydrogenase operon AcoR from Pseudomonas fluorescens FW300-N2E2

 Score =  275 bits (703), Expect = 4e-78
 Identities = 213/627 (33%), Positives = 309/627 (49%), Gaps = 57/627 (9%)

Query: 12  VIADSWNRCIAWGLDHDHEPAPLKPEPARLEEINRQ---HSEL-LSVTEAEVLPYYRNVL 67
           +I DSW R +     H  +P  L+      +++ +Q    SEL L++   EV   +  V 
Sbjct: 31  LILDSWRRSLE---QHHLDPGSLQGPRILSQDVLKQCRERSELFLNIASEEVARLHGRVR 87

Query: 68  SNSRCLILLADQHATVLSSWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAVGGPV 127
               C +LL D     +    +  I     K     G  W E   GT  +   +    PV
Sbjct: 88  DADYC-VLLTDAQGQTIDYRVETTIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTAKAPV 146

Query: 128 QIQRNEHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFSDAYLPQAHTLGMVR-LLSQSVEN 186
            + + +HF      +  SAAP+FD   ++ GVL V +        +  ++R ++ QS   
Sbjct: 147 TVHKRDHFRAAFIGLTCSAAPVFDPQGELLGVLDVSAVRSPDDRRSQHLIRQMVVQSA-- 204

Query: 187 RLINRQF----GPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLLGMN--T 240
           R I + F       ++ +  +  A   DS    +   DD G + A N  A Q L  +   
Sbjct: 205 REIEQAFFMSSAQGYWVLRAHRNAGYVDSQPDFLFAWDDDGCLQALNPAARQYLLQHYGQ 264

Query: 241 VEARLDELFTRHRNHILGHPETETL-QLTTRSKVRLSARIKRPTRIPDANGKTKPSPVPE 299
           +   + ++F +    +L     E+L  L      RLSA  +R      A+ ++       
Sbjct: 265 LPQHIGQVFDQQ---LLHRARDESLCSLDHAMHGRLSAPRQR------ASSRS------- 308

Query: 300 DLRQSARPLDIDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGVGKEVLVKALHRASH 359
             R +  PL+ID        +      +++V +R LPVLI GETG GKEV  + LH+AS 
Sbjct: 309 --RVAVTPLEID------PRLADSLRLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQ 360

Query: 360 RKDQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGVLFLDEIGEMP 419
           R+D+P VA+NCAAIP  L+ESELFGY AGAFTGA A+G  G +++A  G LFLDEIG+MP
Sbjct: 361 RRDRPFVALNCAAIPESLIESELFGYVAGAFTGASAKGMQGLLQQADGGTLFLDEIGDMP 420

Query: 420 LSAQSRLLRVLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENGHFRADLYYRINGLC 479
           L+ Q+RLLRVL E  V P+G++    VDI ++ AT+R L T +  G FR DLY+R+ G  
Sbjct: 421 LALQTRLLRVLAEGEVAPLGASRRKAVDIQVICATHRDLETLVAAGEFREDLYFRLGGAR 480

Query: 480 VELPALRNRADRRMLIQSLYARHRD-PGQSEQLSPKVLSALEAHPWPGNIRQLVNVLRVA 538
            +LP LR R+DR  LI  + A      G + QLS   L  L  + WPGN+RQL +VLR A
Sbjct: 481 FQLPPLRERSDRLALINRILAEESALCGATVQLSGAALECLLGYHWPGNVRQLRHVLRYA 540

Query: 539 IAIADGEQVQVWHLPEDFLAEFEANPLEQSDPPMQEQPVAGSEAETEDTLARTLQIYRKC 598
            A+ +   VQ+ HLPE          +  +D      P   +  E +  L   ++   K 
Sbjct: 541 CAVCEASVVQLSHLPES---------MHHTD-AADHGPEPSASPERQALLDALVRHRWKP 590

Query: 599 TGNISQAARELSISRNTLYKRLREMGV 625
           T     AAR L ISR TLY+R+   G+
Sbjct: 591 TA----AARALGISRATLYRRVNLHGI 613