Pairwise Alignments

Query, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

Subject, 630 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  266 bits (681), Expect = 2e-75
 Identities = 200/626 (31%), Positives = 298/626 (47%), Gaps = 46/626 (7%)

Query: 12  VIADSWNRCIAWGLDHDHEPAPLKPEPARLEEIN---RQHSEL-LSVTEAEVLPYYRNVL 67
           +I DSW R +     H  +P  L+      + +    R+ SEL L +   EV   +  V 
Sbjct: 31  LILDSWRRSME---QHHLDPGSLQGPRILSQNVLQECRERSELFLRIASEEVARLHGRVR 87

Query: 68  SNSRCLILLADQHATVLSSWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAVGGPV 127
               C +LL D     +    +  I     K     G  W E   GT  +   +    PV
Sbjct: 88  DADYC-VLLTDAQGQTIDYRVETSIRNDCRKAGLYLGTCWSEGEEGTCGVAAVLTARTPV 146

Query: 128 QIQRNEHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFSDAYLPQAHTLGMVR-LLSQSVEN 186
            + + +HF      +  SAAP+FD   ++ GVL V +        +  ++R ++ QS   
Sbjct: 147 TVHKRDHFRAAFIGLTCSAAPVFDPKGELLGVLDVSAVRSPDDRRSQHLIRQMVVQSA-- 204

Query: 187 RLINRQF----GPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLL--GMNT 240
           R I + F       ++ +  +++    DS    +L  D+ G + A N  A Q L      
Sbjct: 205 REIEQAFFMSSAQGYWVLRAHSSPGYVDSQPDYLLAWDNDGCLQALNPAARQWLLHRFGQ 264

Query: 241 VEARLDELFTRHRNHILGHPETETLQLTTRSKVRLSARIKRPTRIPDANGKTKPSPVPED 300
           +   + ++F +   H +   E+  L  +     +L  R+  P R+     +   +P   D
Sbjct: 265 LPEHIGQVFDQQLLHRISD-ESLCLLHSQGGHTQLHGRLSVPRRVNRNASRLALTPAELD 323

Query: 301 LRQSARPLDIDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGVGKEVLVKALHRASHR 360
            R                 ++     +++V +R LPVLI GETG GKEV  + LH+AS R
Sbjct: 324 PR-----------------LEESLRLAVRVKDRNLPVLIQGETGSGKEVFARQLHQASQR 366

Query: 361 KDQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGVLFLDEIGEMPL 420
           +++P VAVNCAAIP  L+ESELFGY AGAFTGA ++G  G + +A  G LFLDEIG+MPL
Sbjct: 367 RERPFVAVNCAAIPENLIESELFGYVAGAFTGASSKGMQGLLEQADGGTLFLDEIGDMPL 426

Query: 421 SAQSRLLRVLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENGHFRADLYYRINGLCV 480
           S Q+RLLRVL E  V P+G++    +D+ +V A++R L   +  G FR DLY+R+NG   
Sbjct: 427 SLQTRLLRVLAEGEVAPLGASRRKAIDLQVVCASHRDLEGLVAAGEFREDLYFRLNGARF 486

Query: 481 ELPALRNRADRRMLIQSLYARHRD-PGQSEQLSPKVLSALEAHPWPGNIRQLVNVLRVAI 539
           +LP LR R+DR  LI  +         +   L    L  L  + WPGN+RQL +VLR A 
Sbjct: 487 QLPPLRERSDRLALINRILDEESTLCAEPMHLGGAALECLLGYRWPGNVRQLRHVLRYAC 546

Query: 540 AIADGEQVQVWHLPEDFLAEFEANPLEQSDPPMQEQPVAGSEAETEDTLARTLQIYRKCT 599
           A+ D   +QV HLPE            + D P     +    +     L   L  +R   
Sbjct: 547 AVCDSNLIQVSHLPEQLQD-------HRLDGPGSGDTIDCCASPERQALLDALVRHR--- 596

Query: 600 GNISQAARELSISRNTLYKRLREMGV 625
              + AA+ L ISR TLY+R+ + G+
Sbjct: 597 WKPTAAAKSLGISRATLYRRVHQHGI 622