Pairwise Alignments

Query, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

Subject, 638 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  320 bits (821), Expect = 9e-92
 Identities = 216/626 (34%), Positives = 334/626 (53%), Gaps = 34/626 (5%)

Query: 13  IADSWNRCIA-WGLDHDHEPAPLKPEPARLEEINRQHSELLSVTEAEVLPYYRNVLSNSR 71
           IA SW RC+  + LD     AP   E  R+ E   +  ++L +   E+   ++  LS + 
Sbjct: 32  IARSWLRCLEDYHLDPALTMAPTVLEHGRVLESRERLQQVLQIAGGEMTSLHQQ-LSGAG 90

Query: 72  CLILLADQHATVLS--SWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAVGGPVQI 129
             +LL D    +L+  +   ER    R   W   GA+W E   GTN IGT +     + I
Sbjct: 91  HAVLLTDARGVILNCVTAPAERKIFERAGLWL--GADWSEACEGTNGIGTCLVERQSLTI 148

Query: 130 QRNEHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFSDAY----LPQAHTLGMVRLLSQSVE 185
            ++EHF   +  +  SA+P+FD H ++  VL V S  +      Q HT+ +V L ++ +E
Sbjct: 149 HQDEHFRGRHTGLTCSASPVFDPHGELLAVLDVSSARHDVSRQSQFHTMALVNLSAKMIE 208

Query: 186 NRLINRQFGPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLLGM---NTVE 242
           +    R F  + + +  +  A++      G+L  D  G++ A NQ A  LLG      + 
Sbjct: 209 SCYFLRYFD-NQWLLRFHLQAESVGLFSEGLLAFDGEGRISAVNQSALNLLGHIRGGLLG 267

Query: 243 ARLDELFTRHRNHILGHPETETLQ---LTTRSKVRLSARIKRPTRIPDANGKTKPSPVPE 299
             ++  F    + +LG           L TR    L A ++   R         P+PV +
Sbjct: 268 QPVEAFFDCSLDELLGRASVNAAASWPLRTRDGRVLFALLRGQPR-------NVPTPVLQ 320

Query: 300 DLRQSARPLDIDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGVGKEVLVKALHRASH 359
               + RP+ +  +  GD  ++    ++L+V ER +P+LI GETG GKE   KA+H+AS 
Sbjct: 321 PPLIAERPV-LTGICLGDEGLQADFRKALRVFERDVPLLINGETGSGKEAFAKAVHQASQ 379

Query: 360 RKDQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGVLFLDEIGEMP 419
           R D   VA+NCAAIP  L+ESELFGY  G+FTGAR +G  G +++A  G LFLDEIG+MP
Sbjct: 380 RADNAFVALNCAAIPESLIESELFGYRGGSFTGARKEGMRGKLQQADGGTLFLDEIGDMP 439

Query: 420 LSAQSRLLRVLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENGHFRADLYYRINGLC 479
           L+ Q+RLLRVL++R V P+G  + +PV++ +++AT+R L  R+++G FR DLYYR+NGL 
Sbjct: 440 LALQTRLLRVLEDRQVVPIGG-EPLPVNVRIISATHRNLLERVQDGSFREDLYYRLNGLE 498

Query: 480 VELPALRNRADRRMLIQSLYARHRDPGQSEQLSPKVLSALEAHPWPGNIRQLVNVLRVAI 539
           + LPALR R+D+  L+  L A     G++  +      AL  + WPGN+RQL NVLR   
Sbjct: 499 IALPALRERSDKSQLLDFLLA-EESGGEAVLIDAAARQALLDYAWPGNVRQLRNVLRTLA 557

Query: 540 AIADGEQVQVWHLPEDFLAEFEANPLEQSDPPMQEQPVAGSEAETEDTLARTLQIYRKCT 599
           A+ D  +++V  LP   + +    P+      + E P+  +E          L    +  
Sbjct: 558 ALCDDGRIRVEDLPA-IIRQARPAPVLAQVEEVSEYPLDDAER------LALLNALEQQR 610

Query: 600 GNISQAARELSISRNTLYKRLREMGV 625
            +++  A +L +SRNTLY++LR+ G+
Sbjct: 611 WHMTHTAEQLGVSRNTLYRKLRKHGI 636