Pairwise Alignments

Query, 626 a.a., sigma-54 dependent transcriptional regulator from Marinobacter adhaerens HP15

Subject, 657 a.a., GAF modulated sigma54 specific transcriptional regulator, Fis family from Paraburkholderia bryophila 376MFSha3.1

 Score =  338 bits (867), Expect = 4e-97
 Identities = 222/637 (34%), Positives = 325/637 (51%), Gaps = 36/637 (5%)

Query: 13  IADSWNRCIAWGLDHDHEPAPLKPEPARLEEINRQHSELLSVTEAEVLPYYRNVLSNSRC 72
           I  S  R   +GL     P      PA    +  + + +L      V+      + N++ 
Sbjct: 24  IQKSHERSEVFGLSESMRP-DYDVLPAGELALKLEQNRILCAHATPVMETLHEQIVNTQS 82

Query: 73  LILLADQHATVLSSWGDERITETRLKPWFQTGANWQEQNCGTNAIGTSIAVGGPVQIQRN 132
           +I+L D    +L S GD+       K   + GANW E   GTNAIGT++A      +   
Sbjct: 83  MIVLTDAEGLILHSIGDDDFLRRAEKVALRPGANWAENRQGTNAIGTALAERSATVVHGE 142

Query: 133 EHFLKTNRSIIGSAAPIFDAHRQIAGVLSVFSDAYLPQAHTLGMVRLLSQSVENRLINRQ 192
           +H+L  NR +  S+ PI D +  + GVL V  D      HT+ + ++  Q +EN L    
Sbjct: 143 QHYLAANRFLTCSSVPILDPYGDLIGVLDVTGDHRSYHQHTMALAKMSVQMIENHLFANT 202

Query: 193 FGPDHFQITLNTTADNFDSPWSGILVCDDSGQVIASNQRADQLLGMNTVEAR---LDELF 249
           F  +  QI  +   +   +   GI      G+ +++N+ A   LG+     R   L  LF
Sbjct: 203 FR-ETLQIAFHGRPEFLGTLMEGIAAFTCDGRFLSANRSAQFQLGLPLAGLRAHTLSSLF 261

Query: 250 TRHRNHILGHPETE-----TLQLTTRSKVRLSARIKRPT--------RIPDANG---KTK 293
                 ++    T      +L L+  + V  + R +R T        R P  +    +++
Sbjct: 262 GLTSAQLIDRLRTHRDRHLSLNLSNGAVVCANVRFRRSTVAEEPARSRTPTESAAAQRSE 321

Query: 294 PSPVPEDLRQSARPLD-IDNLDYGDSAVKRCATQSLKVLERGLPVLITGETGVGKEVLVK 352
           PS +P      A PL  +  LD GD  +     +  KV+ + +P+LITGETG GKE+L +
Sbjct: 322 PSAMP------AHPLSKLGYLDTGDPQIAAVIAKVRKVIGKNIPILITGETGTGKELLAQ 375

Query: 353 ALHRASHRKDQPLVAVNCAAIPPELVESELFGYEAGAFTGARAQGSLGFIRKAHKGVLFL 412
           A+H  S R+  P VAVNCA+IP  L+ESELFGYE GAFTGAR +G++G + +A+ G LFL
Sbjct: 376 AIHNDSPRRAGPFVAVNCASIPETLIESELFGYEEGAFTGARRKGAVGKLLQANGGTLFL 435

Query: 413 DEIGEMPLSAQSRLLRVLQERVVTPVGSTDSVPVDILLVTATNRPLTTRIENGHFRADLY 472
           DEIG+MP   Q RLLRVLQER+V P+GST S+PVD+ ++ AT+R L   I    FR DLY
Sbjct: 436 DEIGDMPYPLQVRLLRVLQERLVNPLGSTKSIPVDVAIICATHRDLREMIAQSRFREDLY 495

Query: 473 YRINGLCVELPALRNRADRRMLIQSLY---ARHRDPGQSEQLSPKVLSALEAHPWPGNIR 529
           YR+NGL V+LP LR R D   +I+ +    A     GQ+  ++  V++      WPGN R
Sbjct: 496 YRLNGLVVKLPPLRERTDLSAVIRKMLDCAAAENGGGQALSIADDVMTLFGQCAWPGNFR 555

Query: 530 QLVNVLRVAIAIADGE-QVQVWHLPEDFLAEFE-ANPLEQSDPPMQEQPVAGSEAETEDT 587
           QL N+LR A  + D + +++  HLP+DF  +   A P       +   P           
Sbjct: 556 QLGNLLRTAAVMVDADGEIRREHLPDDFFDDLRVAGPSSPHGVDVLSLPSGRLHDVAASV 615

Query: 588 LARTLQIYRKCTGNISQAARELSISRNTLYKRLREMG 624
           +A  +  +    GN+S AAR L ISRNT+Y++L   G
Sbjct: 616 IANAVAQH---GGNVSAAARTLGISRNTIYRKLPAHG 649