Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  297 bits (760), Expect = 5e-85
 Identities = 164/394 (41%), Positives = 243/394 (61%), Gaps = 7/394 (1%)

Query: 3   TPTVLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSGLTEIEKRTPDVVLLDLKLPDQSG 62
           T  +L++DDE  L   L  +L +  + VF A +G   L  +E+   D+V+ D ++P   G
Sbjct: 2   THNILVVDDEPKLCDLLASALSQNDIQVFTASNGLHALKVLEQEDIDLVISDWRMPGMDG 61

Query: 63  FEVLDQVQA-LPAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNHKH 121
            ++L +++   P  P+ +M +A+   + AV++++ GA DYI KPFD+DEL + + +  + 
Sbjct: 62  PQLLAEIKVRYPQLPVIVM-TAYSTVKNAVQSMRNGAFDYIAKPFDIDELDITVNKALQF 120

Query: 122 RQLTEEVAYRR---EREADVHGLVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSGKTL 178
           R + ++    R   E    +  LVG S   R++L  V+ + +S+A T+LL G SG+GK +
Sbjct: 121 RDILKDNQRMRAELEEHQQIDSLVGDSPTFRRVLQAVDSVRESNA-TILLTGESGTGKEM 179

Query: 179 IAKALHATKDRA-APFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANGGTL 237
           +A+A+H   +RA  PFV+VNCA++PE LLE+E+FG  KGA+TGA   R G    A+ GTL
Sbjct: 180 VARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTL 239

Query: 238 FLDEIGELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAFRED 297
           FLDE+G++PL LQAK+L  L+      VG  +E + D+RVIAA+N++L        FRED
Sbjct: 240 FLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFRED 299

Query: 298 LFYRLNVMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDWPGN 357
           L+YRLNV P+ +P+L ER +DI  LA +FA  L A  G R    S E L  + NY WPGN
Sbjct: 300 LYYRLNVFPIPLPALRERVEDIAPLARHFAHTLGATAGKRITGFSPEALQAMANYSWPGN 359

Query: 358 IRELRNTIERLTILHAGESINVDQLPPEITKSAP 391
           IREL+N +ER TI+ +G  I  D LP  +  S P
Sbjct: 360 IRELQNCVERATIVASGSVIEEDDLPAYLFASRP 393