Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 470 a.a., nitrogen regulation protein NR(I) from Rahnella sp. WP5

 Score =  294 bits (753), Expect = 3e-84
 Identities = 165/395 (41%), Positives = 245/395 (62%), Gaps = 5/395 (1%)

Query: 1   MRTPTVLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSGLTEIEKRTPDVVLLDLKLPDQ 60
           M+   V I+DD+ ++   L  +L   G+T      G   L  I  +TPDV+L D+++P  
Sbjct: 1   MQRGIVWIVDDDSSIRWVLERALTGAGLTCTTFDSGNEVLDAIATQTPDVLLSDIRMPGM 60

Query: 61  SGFEVLDQV-QALPAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNH 119
            G  +L Q+ Q  P  P+ IM +AH D  AAV A ++GA DY+ KPFD+DE + L++R  
Sbjct: 61  DGLALLKQIKQRHPMLPVIIM-TAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAI 119

Query: 120 KHRQLTEEVAYRREREADVHGLVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSGKTLI 179
            H Q  ++ A  +        ++G + AM+ +   + R+ +SS  +VL+ G SG+GK L+
Sbjct: 120 SHYQEQQQPARSQPASGPTADIIGEAPAMQDVFRIIGRLSRSSI-SVLINGESGTGKELV 178

Query: 180 AKALHATKDRA-APFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANGGTLF 238
           A ALH    RA APF+++N A++P++L+E+ELFG EKGA+TGA+  R G  E A+ GTLF
Sbjct: 179 AHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQADNGTLF 238

Query: 239 LDEIGELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAFREDL 298
           LDEIG++PL +Q +LL  L   +F  VGG   ++ D+R+IAA++++L+   Q G FREDL
Sbjct: 239 LDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDL 298

Query: 299 FYRLNVMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDWPGNI 358
           F+RLNV+ + +P L ERR+DIP LA  F    A + G    NL  ET T L    W GN+
Sbjct: 299 FHRLNVIRVHLPPLRERREDIPRLARYFLQVAAKELGVEAKNLHPETETALTRLPWQGNV 358

Query: 359 RELRNTIERLTILHAGESINVDQLPPEITK-SAPQ 392
           R+L NT   LT++ AG+ + +  LP E+ + SAP+
Sbjct: 359 RQLENTCRWLTVMAAGQEVLIQDLPSELFETSAPE 393