Pairwise Alignments

Query, 392 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

Subject, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  282 bits (721), Expect = 2e-80
 Identities = 157/390 (40%), Positives = 239/390 (61%), Gaps = 5/390 (1%)

Query: 6   VLIIDDEKNLVSSLMFSLEEEGMTVFAAYDGKSGLTEIEKRTPDVVLLDLKLPDQSGFEV 65
           VLIIDDEK + S L   +E EG     A  GK GL  ++     +V+ D+KLPD +G  +
Sbjct: 5   VLIIDDEKKICSLLSRIIELEGFKTLQANTGKEGLKLLKNNDVSIVISDVKLPDVNGVAL 64

Query: 66  LDQVQALPAPPITIMISAHGDTRAAVEAVKKGAQDYITKPFDLDELILLIQRNHKHRQLT 125
           +  ++A+ +    I ++A+G     V A+K GA DY+ K  D D++I L+ +      L 
Sbjct: 65  VKDIKAIKSYVEIINLTAYGTIADGVLAIKNGAFDYLVKGDDNDKIIPLLYKAMDKSNLQ 124

Query: 126 EEVAYRREREADVHG---LVGHSSAMRKLLDQVERIGKSSARTVLLQGPSGSGKTLIAKA 182
             V+    + A  H    ++G S ++ + +D  +++  +   TVLL G +G+GK + A++
Sbjct: 125 RRVSDLENKIAKKHSFQTIIGQSKSLMEAIDLAKKVSATDT-TVLLLGETGTGKEVFAQS 183

Query: 183 LHATKDRAA-PFVSVNCASLPENLLEAELFGAEKGAYTGADKRRTGLVELANGGTLFLDE 241
           +H    RAA PFV++NC+    +LLE+ELFG + GA+TGA+K + GL+E ANGGTL LDE
Sbjct: 184 IHYESPRAAKPFVALNCSGFSPDLLESELFGYKAGAFTGANKDKKGLLEEANGGTLLLDE 243

Query: 242 IGELPLPLQAKLLTFLETHRFRAVGGQKEIEADLRVIAASNRDLQTEAQTGAFREDLFYR 301
           IGE+ L LQAKLL  LE+  F  VG  +  + ++R++AA+N+DL+ +A +G FR DL+YR
Sbjct: 244 IGEMNLDLQAKLLRVLESQTFIKVGDTQTQQVNVRILAATNKDLKADAASGKFRSDLYYR 303

Query: 302 LNVMPLTIPSLAERRDDIPMLASNFATGLAAQEGCRPINLSSETLTTLCNYDWPGNIREL 361
           L+V  +T+P L ER+ DIP LA  +    A +       +  + L+ L ++ W GNIREL
Sbjct: 304 LSVFTITLPPLRERKADIPALAKYYLKEFADKVNRSTPKMDDKILSLLSDHSWKGNIREL 363

Query: 362 RNTIERLTILHAGESINVDQLPPEITKSAP 391
           +N IERL IL  G++++V  LPPE  + AP
Sbjct: 364 KNVIERLVILSDGDTLSVTALPPEFFEFAP 393