Pairwise Alignments

Query, 480 a.a., cytochrome d ubiquinol oxidase subunit I from Marinobacter adhaerens HP15

Subject, 478 a.a., cytochrome D ubiquinol oxidase subunit I from Pseudomonas fluorescens FW300-N2C3

 Score =  473 bits (1216), Expect = e-138
 Identities = 238/475 (50%), Positives = 319/475 (67%), Gaps = 8/475 (1%)

Query: 3   LDPLILSRIQFAFVVSFHAIFPVFTIGLASYIAVLEGLAFKTENPLWVKLSAFWTKVFAV 62
           L+ L L+RIQFAF +SFH +FP  TIGLASY+AVLEGL  KT +  +  L  FW+K+FAV
Sbjct: 4   LEALDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRDDTYRDLYHFWSKIFAV 63

Query: 63  VFGMGVVSGIVMSFQFGTNWSNFAQASANFLGPILSYEVVTAFFLEAAFLGVLLFGRDKV 122
            FGMGVVSG+VM++QFGTNWS F+  +    GP+L+YEV+TAFFLEA FLGV+LFG ++V
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNRV 123

Query: 123 PAGVHLFAAIMVATGTFISSFWILSANSWMQTPAGTELRDGVFYVTSWSEAIFNPSFPYR 182
             G+H F+ +MVA GT IS+FWILS+NSWMQTP G E+ DG      W   +FNPSFPYR
Sbjct: 124 GRGLHFFSTVMVAIGTLISTFWILSSNSWMQTPQGYEIIDGRVIPVDWLAVVFNPSFPYR 183

Query: 183 FAHMALASFLTGGFVVAGVSAWYLLRGREVEANKKALSMCLWLLLFIAPAQAVLGDFHGL 242
             HM+ A+F+   F V   +AW+LLRGR+  A ++ LSM +W+ L +AP QAV+GDFHGL
Sbjct: 184 LLHMSTAAFVATAFFVGSSAAWHLLRGRDNPAIRRMLSMAMWMALLVAPIQAVIGDFHGL 243

Query: 243 NTLEHQPAKVSAMEGNWETSRN--VPLLLFAIPDQENQRNLFEIGIPSLASFILTHEWDG 300
           NTL+HQPAK++A+EG+WE   N   PL+LF  PD + ++  + + IP L S ILTH  D 
Sbjct: 244 NTLKHQPAKIAAIEGHWENVGNEPTPLILFGWPDMQAEKTKYAVEIPYLGSLILTHSLDK 303

Query: 301 EVPGLNEVAVEEQPPVAIVFWSFRIMVGIGLLMIAFAVTGLVLRAGGRYWRTSWFLQGMR 360
           +VP L E   E++P   IVFWSFR+MVG+GLLMI   +  L LR   R +++  FL  + 
Sbjct: 304 QVPALKEFPPEDRPNSTIVFWSFRVMVGLGLLMIFTGLCSLWLRRKDRIYQSRPFLYMVL 363

Query: 361 FMSIAPFFAVLTGWFVTETGRAPWLVYGQMIQAQALTPSLTGGMALFTLIGYIVVYALVF 420
           +M  +   A+L GWF TE GR PW+VYG M  A A +      M++ TL+ ++VVY  +F
Sbjct: 364 WMGPSGLVAILAGWFTTEIGRQPWVVYGLMRTADASSGHSFAQMSI-TLVLFVVVYFALF 422

Query: 421 SAGVYYLMRVLYVGLEDHDEDEHEA-----ERPKRPFSAAHVPFEIDHDSGDTVG 470
            AG+ Y+MR++  G E H+ +  +        P RP SAA    ++DH+     G
Sbjct: 423 GAGLSYMMRLVRKGPEAHEAEPSDGGPGQKRTPARPLSAADDGDDVDHNDRSNKG 477