Pairwise Alignments

Query, 539 a.a., NADH dehydrogenase subunit L from Marinobacter adhaerens HP15

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (397), Expect = 1e-42
 Identities = 122/458 (26%), Positives = 205/458 (44%), Gaps = 47/458 (10%)

Query: 9   LLSILALWLLLPVGLFLLAGLTGWLKNPLKVNHCWRLAGWALLASMAVSVVMGILLLIQP 68
           +L  LA++L L     L A  TG+    L      RL        MA+S +    +    
Sbjct: 1   MLYFLAVFLPL-----LTAIATGFFGRALGDKGAQRLT----CLGMAISALFSWFIFFDT 51

Query: 69  YTGGDSNRLAT--------LGGRFGLYPDGIAVWMATMVAFIGWVILRFADNYLSQDPGR 120
             GG++  +          L   + L  D ++  M  +V  I +++  ++  Y+  D   
Sbjct: 52  ALGGNNTTVTLFTWVISGDLHFDWALKIDTLSAVMLMVVTTISFMVHIYSVGYMHHDASV 111

Query: 121 DRFLPWFLVTVASVLVLVFTNHLLILAGAWIGVSLALHHLLTLYQDRPQARMAAVQKFIV 180
            RF+ +  +    +L+LV  ++L+ +   W GV LA + L+  + ++P A  AA++ F+V
Sbjct: 112 PRFMAYLSLFTFFMLMLVTADNLVQMFFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVV 171

Query: 181 SRVGDALVVSGVVALYLHYGTFYLPDMVQNEGARAGGST--------ALTVASVVLALAA 232
           +RVGD     G+  ++  +GT  L  +       A            A+T+  ++L + A
Sbjct: 172 NRVGDFGFTLGIFGVFFVFGTVGLDAIFAGAAQHANDVVTFFGIEWHAMTILCLLLFIGA 231

Query: 233 VLKCAQIPFHGWLIRVMEAPTPVSALLHAG-VINLGGFLWLRLFPVFDGFTAGHMILLVI 291
           + K AQ+  H WL   ME PTPVSAL+HA  ++  G F+  R+ P+F        ++ ++
Sbjct: 232 MGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFMVARMSPLFVLSDTAMTVVTIV 291

Query: 292 GGMTAVVAVLTMITQYSVKHALAWSTCAQMGFMLFEIGMGAYTLALLHLLAHSLYKAHSF 351
           G  TA+ A      Q  +K  +A+STC+Q+G+M F +G+GA+   + HL+ H+ +KA  F
Sbjct: 292 GASTAIFAATVGCVQNDIKRVIAYSTCSQLGYMFFALGVGAFGAGIFHLMTHAFFKALLF 351

Query: 352 LASGRTVAVSAATR--------FPESPSANRLSWAGLTGLLAAAILVQFPWIVENNPVFG 403
           L +G  +   +  +        +   P    L W G   L+       F         F 
Sbjct: 352 LGAGSVIHAMSDEQDMRRMGGIWRMVPLTYALMWIGSLALMGVPPFAGF---------FS 402

Query: 404 ALLVLAVSAAAMGIPAGATKAVKLKLAGLAVLLVPLYS 441
             ++L V+ AA     G   A    L  LA  L   YS
Sbjct: 403 KDMILEVAYAA----HGGAGAYAFWLGILAATLTAFYS 436