Pairwise Alignments

Query, 539 a.a., NADH dehydrogenase subunit L from Marinobacter adhaerens HP15

Subject, 1264 a.a., NADH dehydrogenase (quinone) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 86.3 bits (212), Expect = 7e-21
 Identities = 115/462 (24%), Positives = 188/462 (40%), Gaps = 64/462 (13%)

Query: 84   FGLYPDGIAVWMATMVAFIGWVILRFADNYLSQDPGRDRFLPWFLVTVASVLVLVFTNHL 143
            FG   D I+   A +V  IG + + +A  Y+     + RF  +FL  V  ++ +  +N L
Sbjct: 752  FGRGLDSISFAFALVVPVIGCLNMFYAVGYMEHSHTQWRFYTFFLFMVGGLMGVAASNDL 811

Query: 144  LILAGAWIGVSLALHHLLTLYQDRPQARMAAVQKFIVSRVGDALVVSGVVALYLHYGTFY 203
                  W  +S    + + ++++ P A     + F  + +G A +  GVV L    G   
Sbjct: 812  FGFFTFWEIMSSWSLYFVIVHEENPAALREGFKYFFFNVLGAAFLFLGVVMLSSMAGD-- 869

Query: 204  LPDMVQNEGARAGGSTALTVASVVL-ALAAVLKCAQIPFH-GWLIRVMEAPTPVSALLHA 261
             P       A      AL   +V L A+   +K AQ+PF     +    APTPVS  + +
Sbjct: 870  -PSFGAVRSALPTMPVALAATAVALMAIGFTMKAAQLPFRIDVQMHPATAPTPVSGYISS 928

Query: 262  GVINLGGFLWLRLFPVFDGFTAGHMILLV--------------IGGMTAVVAVLTMITQY 307
             ++    F   +LF V  G  AG    L               +GG+T V+A L  + Q 
Sbjct: 929  VLLKSALFGLAKLFFVLGG--AGFFTGLASQWGQPQVMYAIAWVGGITIVMAALLAVMQS 986

Query: 308  SVKHALAWSTCAQMGFMLFEIGMG---AYTLALLHLLAHSLYKAHSFLASGRTVAVSAAT 364
             +K  L +ST +Q+G+M+  + +G        +LHL+ H L+K   FL +G  +  +   
Sbjct: 987  DLKLVLIYSTVSQLGYMVVGVALGTPLGMAGGMLHLVNHVLFKDLLFLVAGSLILCTHKH 1046

Query: 365  RFPESPSANRLSWAGLTGLLAAAILV---------QFPWIVENN------------PVFG 403
               E     +     LT     A+ V            WI+ +              + G
Sbjct: 1047 SLDELGGIGQRMPVTLTMFAIGALSVVGVPPTNGFASKWILYHALMAEGEVALALLSLAG 1106

Query: 404  ALLVLA-----VSAAAMGIP----AGATKAVKLKLAGLAVL-----LVPLYSLLHFLIGP 449
            ++L LA     + +A +G P    A   +A ++ L  + +L     +  ++  L  L   
Sbjct: 1107 SVLTLAYFAKFLHSAFLGRPSPELAHVHEAPRIMLVPMGILAAGCIITGVFPGLPLLAID 1166

Query: 450  AVPEQEGFA----IP-GIALGTGATLVTLLAVCSLMIAFGAR 486
             +  + GFA     P G+A G GA   T LAV   +  FG R
Sbjct: 1167 MMGRELGFAGLMVAPWGVASGAGAFNATALAVLLAVAFFGGR 1208



 Score = 74.3 bits (181), Expect = 3e-17
 Identities = 105/426 (24%), Positives = 174/426 (40%), Gaps = 66/426 (15%)

Query: 89  DGIAVWMATMVAFIGWVILRFADNYLSQDPGRDRFLPWFLVTVASVLVLVFTNHLLILAG 148
           D ++     ++A IG V+  ++  Y+  D     +  WF               LL++ G
Sbjct: 279 DPLSRLFGVIIAGIGLVVAVYSTGYIHHDRRAGGY--WFF--------------LLLMCG 322

Query: 149 AWIGVSLALH---------------HLLTLYQDRPQARMAAVQKFIVSRVGDALVVSGVV 193
           +  G++LA                 + L  ++   +A  AAV+ F++   G   ++ G +
Sbjct: 323 SLSGLALARDFGGFYVFWELMTFSSYFLVAHEATDKAFHAAVKYFVMCVAGACAMLPGFM 382

Query: 194 ALYLHYGTFYLPDMVQNEGARAGGSTALTVASVVLALAA-VLKCAQIPFHGWLIRVMEA- 251
            L    GT    D     G  A     +   +VVLA     +K   +P HGWL     A 
Sbjct: 383 LLSAQAGTL---DFAALAGLAATLPAPVVKGAVVLAFVGFAVKAGLVPGHGWLPDAHPAA 439

Query: 252 PTPVSALLHAGVINLGGFLWLRLF-PVFD------------GFTAGHMILLVIGGMTAVV 298
           P+ +S  L   +   G +  +RL   VF             GF++  +++  +G  T + 
Sbjct: 440 PSSISGPLSGILTKTGVYGTVRLMLAVFGSAVLLKAGESAGGFSSMGLLVTALGTATMLY 499

Query: 299 AVLTMITQYSVKHALAWSTCAQMGFMLFEIGMG---AYTLALLHLLAHSLYKAHSFLASG 355
             L  + Q  +K  LA+ST  Q+G +   IG+G   A T +LLH+L H++ K   FL +G
Sbjct: 500 GELMALKQDDLKRLLAYSTMGQVGEIFMVIGLGTWLATTGSLLHVLNHAIMKNLLFLCAG 559

Query: 356 RTVAVSAATRFPESPSANRL----SWAGLTGLLAAAILVQFPWIVENNPVFGALLVLAVS 411
             +  + + +  +     R+    +   + GL++   L  F      N   G  L+L   
Sbjct: 560 GLILRAGSKKLADLAGMARVMPFTAGCMVVGLISIMGLPPF------NGFVGKYLMLQAL 613

Query: 412 AAAMGIPAGATKAVKLKLAGLAVLLVPLYSLL-HFLIGPAVPEQEGFAIPGIALGTGATL 470
            AA G PA A   +   LAG    +  + +L+     GP V  QE      +A G  A L
Sbjct: 614 VAA-GHPAVAAVLLLGSLAGCVYYMRIVRTLVFQPYTGPMV--QEAPVSMRVATGVLAAL 670

Query: 471 VTLLAV 476
             +L V
Sbjct: 671 CLVLGV 676