Pairwise Alignments

Query, 539 a.a., NADH dehydrogenase subunit L from Marinobacter adhaerens HP15

Subject, 643 a.a., NADH dehydrogenase I, chain L (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  130 bits (327), Expect = 2e-34
 Identities = 103/372 (27%), Positives = 174/372 (46%), Gaps = 27/372 (7%)

Query: 10  LSILALWLLLPVGLFLLAGLTG-WLKNPLKVNHCWRLAGWALLASMAVSVVM-------- 60
           + +  L LLLP   FL+ G+ G W+ +         + G  ++ S   +           
Sbjct: 1   MELTILILLLPFLSFLILGIGGKWMSHRTAGAIGTLILGAVVVLSYVTAFQYFSAPRLED 60

Query: 61  GILLLIQPYTGGDSNRLATLGGRFGLYPDGIAVWMATMVAFIGWVILRFADNYLSQDPGR 120
           G    + PY         TL    G+  D I+V M  +++ +  ++  ++  Y+  + G 
Sbjct: 61  GTFATLIPYNFTWLPFTETLRFDLGILLDPISVMMLIVISTVSLMVHIYSFGYMKGETGF 120

Query: 121 DRFLPWFLVTVASVLVLVFTNHLLILAGAWIGVSLALHHLLTLYQDRPQARMAAVQKFIV 180
            R+  +  +   S+L LV   ++  +   W  V ++ + L+  Y  +P A  A+ + FIV
Sbjct: 121 QRYYAFLSLFTMSMLGLVVATNIFQMYLFWELVGVSSYLLIGFYYTKPAAIAASKKAFIV 180

Query: 181 SRVGDALVVSGVVALYLHYGTF-YLPDMVQNEGARAGGSTALTVASVVLALAAVLKCAQI 239
           +R  D   + G++    + GTF + PD V      +GG++ L +A  ++ +    K A  
Sbjct: 181 TRFADLGFLIGILIYGYYGGTFGFTPDTV---SLISGGASMLPLALGLMFIGGAGKSAMF 237

Query: 240 PFHGWLIRVMEAPTPVSALLHAGVINLGG-FLWLRLFPVFDGFTAG--HMILLVIGGMTA 296
           P H WL   ME PTPVSAL+HA  + + G +L  R+FP+F  +     HMI  V G  TA
Sbjct: 238 PLHIWLPDAMEGPTPVSALIHAATMVVAGVYLVARMFPLFIAYAPDTLHMIAWV-GAFTA 296

Query: 297 VVAVLTMITQYSVKHALAWSTCAQMGFMLFEIGMG----------AYTLALLHLLAHSLY 346
             A      Q  +K  LA+ST +Q+GFM+  +G+            Y  ++ HL  H+++
Sbjct: 297 FYAASVACVQSDIKRVLAFSTISQIGFMMVALGVCTSMDPHHGGLGYMASMFHLFTHAMF 356

Query: 347 KAHSFLASGRTV 358
           KA  FL +G  +
Sbjct: 357 KALLFLGAGSII 368