Pairwise Alignments

Query, 620 a.a., excinuclease ABC subunit C from Marinobacter adhaerens HP15

Subject, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

 Score =  586 bits (1510), Expect = e-171
 Identities = 305/605 (50%), Positives = 413/605 (68%), Gaps = 8/605 (1%)

Query: 15  FDSKSFLKQLTERPGVYRMYDEGGSVLYVGKARNLKKRVGSYFRKTGLAPKTEALVGKIA 74
           FD+K+FL  LT+ PGVYRM D  G VLYVGKA+NLKKRV SYF++T  +P+   +V +I 
Sbjct: 19  FDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSPRIALMVSRIC 78

Query: 75  SIEVTITGSETEALLLEQNLIKSLRPPYNILLRDDKSYPYIYLSSHSDYPSLTFRRGRTK 134
            I+ T+T SE EALLLE NLIKSL PP+NIL RDDKSYPY+ L+    +P L F RG   
Sbjct: 79  GIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLT-RDQFPRLAFFRGAPD 137

Query: 135 KGGGTWFGPFPSSGAVKESLNVLQKIFRIRNCSESFFRNRTRPCLQYQINRCTAPCVEYI 194
           +    ++GPFP++  V++S+++LQK F +R C +S F NR+RPCL YQI+RC+ PCV  I
Sbjct: 138 RKAD-YYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRCSGPCVGLI 196

Query: 195 TPEEYQQDIRHATMFLEGKNPAILHDLMNAMEAASKNLEFEKAAAYRDQINHLRHVQEQQ 254
           + E+Y +D++ A MFL+GK   ++  L  AME AS  L FE+AA  RD+I  LR +QE+Q
Sbjct: 197 SAEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQGLRRIQEKQ 256

Query: 255 SVD-GEGGDADVIAIAQDAGIVCIVVIIVRGGRVLGTKDYFPRYSIEQTEGELLSAFLGQ 313
            VD G   DADV+   Q++G++C+ + ++RGG+ LG K  FP+ + +    E ++AFL Q
Sbjct: 257 YVDSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAADCEPAEAIAAFLDQ 316

Query: 314 YYFGGNTRREIPRDILVPVEVEGQELLAQALSESANRETRIRGNVRGERRRWLELAMTNA 373
           +Y        IP  ILV V    +E  A++L+  A R   I+   +   R W+E+A+ NA
Sbjct: 317 HY----REHPIPARILVNVPPADEEA-AESLAALAERPVPIQEPRQTAHRMWVEMAVQNA 371

Query: 374 RQTLLTHLASKETVYRRLLALRDLLELSETPSRMECFDISHSHGENTVASCVVFDENGPL 433
           R  + +  A+     +RL AL++ L L+E P R+ECFDISH+ GE TVASCVV+  NG  
Sbjct: 372 RIAIASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVASCVVYQGNGMR 431

Query: 434 KSDYRLYNIEGVTAGDDYAAMRQVLSRRYKRMVAGEGKRPDLVFIDGGKGQLNIAREVFD 493
           KS+YR YNI  +  GDDYAAMRQ +SRRY ++  GEG  PDL+ IDGGKGQ+ +A    +
Sbjct: 432 KSEYRRYNIRDIQKGDDYAAMRQAVSRRYDKVAVGEGVCPDLILIDGGKGQVGVAYSALE 491

Query: 494 ELEISDIPLIGVAKGVTRRAGMEQLIDAMTGDVFRVPADSPALHLIQHIRDESHRFAITG 553
           EL ++ +P+IGVAKGV R+ G+EQLI        ++P+  PALHLIQ IRDESHRFA++G
Sbjct: 492 ELGLAHVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFAVSG 551

Query: 554 HRARRDKKRRQSTLEGIEGVGPKKRRDLIRYFGGIQELRKAGVDEMTKVQGISKSLAETI 613
           HRA+R K RR STLE I GVGP +R+ LI +FGG+Q +  A VD + +V GIS+ LAE I
Sbjct: 552 HRAQRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLAERI 611

Query: 614 YAALH 618
           Y+ALH
Sbjct: 612 YSALH 616