Pairwise Alignments

Query, 678 a.a., NAD-dependent DNA ligase from Marinobacter adhaerens HP15

Subject, 808 a.a., DNA ligase, NAD-dependent (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  558 bits (1437), Expect = e-163
 Identities = 315/692 (45%), Positives = 425/692 (61%), Gaps = 31/692 (4%)

Query: 11  RVEELRSAIDDHNYRYYVLDDPRVPDAEYDRLFRELQGLETDYPELASDTSPTRRVGSAA 70
           R E LR  ++ H++RYYVLDD  + DAEYD LFRELQ +E ++P L +  SPT RVG   
Sbjct: 36  RAEALRDQLNYHSHRYYVLDDAEISDAEYDALFRELQDIEAEWPSLRTPDSPTHRVGDTV 95

Query: 71  ETSFEEVVHRLPMLSLDNAFSEDELRDFDRRVKDRLGITEDVEYVCEPKLDGLAVSLHYE 130
             + E   H L M SLDNAFS +E   F +R+  R        + C+PK+DGLA+ + YE
Sbjct: 96  VAALETQAHTLRMYSLDNAFSAEEWDGFIQRML-RAEPDAPTAFWCDPKMDGLALEVIYE 154

Query: 131 NGALTTAATRGDGYSGEDITANIRTIPSVPLKLRGDDV-PDLVEVRGEVYMPKDGFEQLN 189
           NG  TTA TRGDG  GE +T  +RT+ ++PL+L G+   P  +EVRGEV + +  F+ LN
Sbjct: 155 NGVFTTALTRGDGEKGEIVTTAMRTVRNLPLRLHGEGPHPARLEVRGEVVITRAEFDALN 214

Query: 190 RRLAERGEKTFVNPRNAAAGSLRQKKSTVTARRPLEMCAYSV------AVTDESLL---- 239
                 GEK F NPRNAAAGS+RQ  ++VTA RPL   AY V      A T +       
Sbjct: 215 AARRGAGEKLFANPRNAAAGSVRQLDASVTAGRPLRFLAYGVGQVVWPAETSDGAASAAQ 274

Query: 240 -PDTQW----EGLKRVQSWGFRINPEMRKARGAEECLEAYSELMDKRDGLPYEIDGIVFK 294
            P+ +W    + +  +  +GF   P+ R+     + +  Y +L  +R  LP++IDG+V K
Sbjct: 275 GPEARWATHGQVMAALADYGFGTPPDARRCETPAQVMAYYEDLGRRRSELPFDIDGVVAK 334

Query: 295 VNRLDQQKALGFVSRAPRWAIAQKFPAQEELTVIEDVEFQVGRTGAVTPVARLKPVFVGG 354
           ++ L  Q ALG+ +RAPRWAIA KFPA +  T +E +  QVGRTG +TPVA L PV VGG
Sbjct: 335 LDDLSAQAALGYTARAPRWAIALKFPAHQATTRLEHIAIQVGRTGVLTPVAELAPVAVGG 394

Query: 355 VTVSNATLHNMDEIRRLDVHIGDTVFIRRAGDVIPQVVKVVAEKRP-SGAREVELPRQCP 413
           VTVS ATLHN DEIR  D+ +GD V ++RAGDVIP+VV+ + ++RP SG  E E P +CP
Sbjct: 395 VTVSRATLHNEDEIRAKDLRVGDMVVVQRAGDVIPEVVRPLVDQRPASGLPEFEFPAECP 454

Query: 414 VCDSDVIQIEGEAVARCSGGLFCPAQRKEAIRHYASRKALDIEGLGDKWIDIMVDQGMVE 473
           VC + V +  GEA  RC   + CPA  +++I H+ S+  LDI+G+G +W++++VD+G V 
Sbjct: 455 VCHTPVRREPGEAAWRCV-NVGCPAVVRQSIIHFVSKAGLDIQGVGRRWVELLVDRGKVT 513

Query: 474 TVADLYRLTTDDLVKLERMGEKSAANLVAAIDRAR-NPVLWRFLYALGIREVGEATAKAL 532
           + ADL+ L    L+  ERMG K A N +AA D AR    L R + ALGIR VGE TA+ L
Sbjct: 514 SPADLFGLDKQTLLAFERMGPKLAENFIAAFDTARTGATLNRLICALGIRHVGEQTARTL 573

Query: 533 AGHFGTLEAIAAADEESLQTVPDVGPIVAGHIRSFFEQTHNRETLDALREAGVRWQEEEV 592
           A HF  L+A+ AA  E+LQ +PD+GP VA  IR+FF    NR  L+ LR  G+ W    V
Sbjct: 574 AAHFADLDALGAAQAETLQQLPDIGPEVAASIRAFFANEGNRALLERLRGVGL-WPVRPV 632

Query: 593 R----------EGEKPLKGQTWVLTGTLSGMTRDEAKEKLESLGAKVAGSVSKKTACVVA 642
           R          EG  PL G   + TG+L+ +TR +A+ +  + GA + GSVSKK   +V 
Sbjct: 633 RPEADAAGAPGEGSGPLAGLRVLFTGSLTTLTRSDAERRAVAAGANILGSVSKKLDLLVV 692

Query: 643 GEAAGSKLAKAEQLEVPVLDEAGLVALLEEHG 674
           G+  GSKL KA +L + VL E   + LLE  G
Sbjct: 693 GDKPGSKLDKATKLGIRVLREQEFLDLLEGRG 724