Pairwise Alignments

Query, 678 a.a., NAD-dependent DNA ligase from Marinobacter adhaerens HP15

Subject, 741 a.a., DNA ligase, NAD-dependent (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  526 bits (1354), Expect = e-153
 Identities = 303/670 (45%), Positives = 405/670 (60%), Gaps = 32/670 (4%)

Query: 23  NYRYYVLDDPRVPDAEYDRLFRELQGLETDYPELASDTSPTRRVGSAAETSFEEVVHRLP 82
           N  Y+  D P + DA+YD L +    +E  +P+L    SP+ +VG+A   +F +V H + 
Sbjct: 65  NAEYHRDDAPSLSDADYDALKQRNAAIEARFPDLKRGDSPSDQVGAAPSDTFSKVTHAVR 124

Query: 83  MLSLDNAFSEDELRDFDRRVKDRLGITED--VEYVCEPKLDGLAVSLHYENGALTTAATR 140
           MLSL NAFS++++RDFD R++  LG+ ED  + Y  EPK+DGL++SL YE+G L  AATR
Sbjct: 125 MLSLANAFSDEDIRDFDTRIRRFLGLAEDAPLAYTAEPKIDGLSLSLRYEHGTLVQAATR 184

Query: 141 GDGYSGEDITANIRTIPSVPLKLRGDDVPDLVEVRGEVYMPKDGFEQLNRRLAERGEKTF 200
           GDG  GE++TAN RTI  +P +L  D  P+++EVRGEVYM    F +LN R AE G KTF
Sbjct: 185 GDGAVGENVTANARTIDDIPHRL--DGAPEVLEVRGEVYMSHADFAELNARQAETGGKTF 242

Query: 201 VNPRNAAAGSLRQKKSTVTARRPLEMCAYSVAVTDESLLPDTQWEGLKRVQSWGFRINPE 260
            NPRNAAAGSLRQ  + +T  RPL+  AY+       L  +TQ E L R + +GF INP 
Sbjct: 243 ANPRNAAAGSLRQLDAEITRARPLKFFAYAWGEISAPLA-ETQTETLARFREFGFTINPL 301

Query: 261 MRKARGAEECLEAYSELMDKRDGLPYEIDGIVFKVNRLDQQKALGFVSRAPRWAIAQKFP 320
             +    E+ L  Y  +  +R  L Y+IDG+V+K++ LD Q+ LGF S  PRWAIA KFP
Sbjct: 302 TVRCETPEDMLAQYRAIEAQRATLGYDIDGVVYKLDDLDLQRRLGFRSTTPRWAIAHKFP 361

Query: 321 AQEELTVIEDVEFQVGRTGAVTPVARLKPVFVGGVTVSNATLHNMDEIR----------- 369
           A+   T +E ++ QVGRTGA++PVARL PV VGGV VSNATLHN D I+           
Sbjct: 362 AELAWTRLEAIDIQVGRTGALSPVARLAPVTVGGVVVSNATLHNEDYIQGRDNTGAPIRW 421

Query: 370 RLDVHIGDTVFIRRAGDVIPQVVKVVAEKRPSGAREVELPRQCPVCDSDVIQIEGEAVAR 429
             D+ +GD V + RAGDVIP++  V   +RP GA   + P  CP C SD  +  G+AV R
Sbjct: 422 GTDIRVGDWVQVYRAGDVIPKIRDVDLSRRPEGAAPFDFPTTCPECGSDAPREPGDAVRR 481

Query: 430 CSGGLFCPAQRKEAIRHYASRKALDIEGLGDKWIDIMVDQGMVETVADLYRLTT------ 483
           CSGGL CPAQ  E ++H+ SR ALDI+GLG K ++     G +   AD++ L        
Sbjct: 482 CSGGLICPAQAVEKLKHFVSRGALDIDGLGAKQVEQFYRDGWIAEPADIFTLRARFGQGL 541

Query: 484 DDLVKLERMGEKSAANLVAAIDRARNPVLWRFLYALGIREVGEATAKALAGHFGTLEAI- 542
             L   E  G+KSA NL  AID AR     + L+ LGIR +GE+ +  LA H+ T+EA+ 
Sbjct: 542 QQLKNREGWGDKSAENLFRAIDTARTAPFAKVLFGLGIRHIGESASSLLANHYLTMEALL 601

Query: 543 ----AAADEES-----LQTVPDVGPIVAGHIRSFFEQTHNRETLDALREAGVRWQEEEVR 593
               AA DE S     L  +  VG ++A  + +   Q   R +++ L            +
Sbjct: 602 AAVDAAVDETSDAWADLLNIDGVGEVMARALVTTLTQEAERASVNRLLAQIDPAPATPPQ 661

Query: 594 EGEKPLKGQTWVLTGTLSGMTRDEAKEKLESLGAKVAGSVSKKTACVVAGEAAGSKLAKA 653
            G+ P+ G+T V TGTL  M+R EAK   E+LGAKVAGSVS KT  ++AG  AGSK  KA
Sbjct: 662 VGDSPVAGKTLVFTGTLETMSRAEAKATAEALGAKVAGSVSAKTDLLIAGPGAGSKATKA 721

Query: 654 EQLEVPVLDE 663
           E L + V+DE
Sbjct: 722 EALGIEVIDE 731