Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 622 a.a., SecD/SecF/SecDF export membrane protein:SecD export membrane protein from Pseudomonas syringae pv. syringae B728a

 Score =  661 bits (1706), Expect = 0.0
 Identities = 351/623 (56%), Positives = 467/623 (74%), Gaps = 7/623 (1%)

Query: 1   MLNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLES 60
           MLNKYPLWK ++IL  LV+GFIY+ PNL+PDD AIQI+GA ++ +VN   +DRA   L  
Sbjct: 1   MLNKYPLWKYVLILAVLVVGFIYSAPNLYPDDSAIQISGASTALQVNQADVDRAAKALAD 60

Query: 61  RGIEVKSSTLQD--RDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLG 118
            GI VK+S+L +  +  L+RL+  EDQL A+ +V+ ALG++Y+VALN+A +TP WL++LG
Sbjct: 61  AGISVKASSLAENGKGGLLRLSKQEDQLPAKDVVRKALGDDYVVALNLARTTPTWLRNLG 120

Query: 119 AGPMKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQDNREIV 178
           A PMKLGLDL GGVHFLLEVDM+ A+  RL    G++K  LR+E++RYR      N  I 
Sbjct: 121 ASPMKLGLDLSGGVHFLLEVDMDKAIDARLKVYEGEVKSLLRKEKVRYRSLPQLGN-VIQ 179

Query: 179 LSFRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTI 238
           L F D+A R +A  +VR  + +F +         +L + L+ A++  I++Y+++QNLTT+
Sbjct: 180 LGFTDDAEREQARALVRKSFTDFEITPAELNGIPVLRMALTPAKLAEIREYSIKQNLTTV 239

Query: 239 RNRVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRMEARQDAPSSET 298
           RNRVNELGVAEPLVQ+QGA+RI+VELPGVQDTA+AKR+LG TANLEFR+ A  D     T
Sbjct: 240 RNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLGAGPDDSKGTT 299

Query: 299 EEFGFRDQPQRTARLEQEVIATGNNVANAQQAFDENGQPQVNITMDSVGGDLMNRATRNA 358
           E F FR+  +  A +E+ +I TG+ V +A+ +FDE+G+PQVNI +D  GG+LM+RATR+ 
Sbjct: 300 EMFEFREGGRPAAAVERGLIITGDQVTDAKASFDEHGRPQVNINLDGHGGELMSRATRSN 359

Query: 359 IGRRMAVLFIEYR-TETETR-MVDGEPQEVENRVV--EKGIISLATVQSALGSSFRITGL 414
           +GR MAV+FIE R T T TR MVDG  ++V  +    +K IISLAT+QS LGS FRITGL
Sbjct: 360 VGRSMAVIFIEQRPTTTYTRQMVDGVEKDVPVQTFKEDKKIISLATIQSPLGSQFRITGL 419

Query: 415 DSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLLYMLVY 474
           +   E++ELALLLRAG LAAPMYF +ERTIGPSLG  NI  G+ +   G   V ++++  
Sbjct: 420 NGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSIFIMAI 479

Query: 475 YRGFGVVANIALTLNLMLLVACMSILSATLTLPGIAGIVLTVGMAVDANVLIFERIKEEL 534
           YR FG++A +AL LN+++L+A MS+L ATLTLPGIAGIVLT+GMAVDANVLIF RI+EE+
Sbjct: 480 YRFFGLIATVALALNMVMLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEI 539

Query: 535 KSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGILTSMFS 594
            +G+  Q AIN G+ RA+ +I DAN+TTLLV  ILFAMG+GPVKGFAVT+ +GI TSMF+
Sbjct: 540 ANGMTVQRAINEGFDRAYTAILDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFT 599

Query: 595 GLMVSRSIVNIVYGGRRVEKLSI 617
            +MV+R++VN++YGGR  +KL I
Sbjct: 600 AIMVTRAMVNLIYGGRDFKKLWI 622