Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 533 a.a., protein translocase subunit SecD from Rhodopseudomonas palustris CGA009

 Score =  317 bits (813), Expect = 6e-91
 Identities = 186/498 (37%), Positives = 300/498 (60%), Gaps = 42/498 (8%)

Query: 124 LGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRG----GD-----VQDN 174
           LGLDL+GG H LLEVD  +    +LD++    +R LRE RI Y G    GD     +  +
Sbjct: 46  LGLDLQGGSHILLEVDANSVKKDKLDSVRDDARRVLREARIAYTGLATKGDSVEVRISKD 105

Query: 175 REIVLSFRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFLLVLTLSEAEVTAIQDYALEQN 234
            ++ ++       ++    +     +  L+    G   L+ LT+ +A +      +++Q+
Sbjct: 106 TDVPVALAKLRELSQPLGGLLGSNGQRSLEVSDAGGG-LIRLTVPQAAIADRVRQSVDQS 164

Query: 235 LTTIRNRVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRM------- 287
           +  +  RVNELG  EPL+Q+QGADRI+V++PG+QD  + K +LG TA L+FRM       
Sbjct: 165 IQIVERRVNELGTVEPLIQRQGADRILVQVPGLQDPTRLKELLGKTAKLDFRMVDSSVSG 224

Query: 288 -EARQDAPSSETEEFGFRDQPQRTARLEQEVIATGNNVANAQQAFDEN-GQPQVNITMDS 345
            +A       ++E       P++   ++++V+ +G ++ +AQ  FD+  G+P V+   ++
Sbjct: 225 DQAMGGNVPPDSELLMSASSPKQPYVIKKQVLVSGADLTDAQPGFDQRTGEPIVSFRFNT 284

Query: 346 VGGDLMNRATRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVVEKGIISLATVQSAL 405
            G     RAT   +G   A++                   ++N V+   +I     +   
Sbjct: 285 NGARKFARATTENVGLPFAIV-------------------LDNEVISAPVIR----EPIT 321

Query: 406 GSSFRITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFG 465
           G S +I+G  ++  A +LA+LLRAGAL AP+  ++ERT+GP LGQ +I+ G  +  +G  
Sbjct: 322 GGSGQISGSFTVQGANDLAILLRAGALPAPLTIIEERTVGPGLGQDSIEKGERAAYVGSI 381

Query: 466 LVLLYMLVYYRGFGVVANIALTLNLMLLVACMSILSATLTLPGIAGIVLTVGMAVDANVL 525
           LV+++ML+ YR FGV AN+A+ +N+ ++   +S+L+ATLTLPGIAGIVLTVG+AVD+NVL
Sbjct: 382 LVIVFMLLTYRLFGVFANLAVAVNVAMIFGVLSLLNATLTLPGIAGIVLTVGIAVDSNVL 441

Query: 526 IFERIKEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLC 585
           I+ERI+EE+++G    +AI++G+ RA  +I D+NITT + A +LF +G+GPV+GFAVTL 
Sbjct: 442 IYERIREEIRAGRNAISAIDAGFKRALATILDSNITTFIAAAVLFYIGTGPVRGFAVTLG 501

Query: 586 IGILTSMFSGLMVSRSIV 603
           IGI+T++F+   ++R IV
Sbjct: 502 IGIITTVFTAFTLTRLIV 519