Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 623 a.a., protein translocase subunit SecD from Dyella japonica UNC79MFTsu3.2

 Score =  486 bits (1252), Expect = e-142
 Identities = 264/628 (42%), Positives = 403/628 (64%), Gaps = 17/628 (2%)

Query: 2   LNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLESR 61
           ++ +P WK  ++ + LV+G +YALPN F    A+Q+T  R+   VN  + ++A+  L+ +
Sbjct: 1   MSDFPRWKYFLVAIVLVLGIVYALPNAFLPQPAVQVTANRNGV-VNQALQEKALHALKQQ 59

Query: 62  GIEVKSSTLQDRDALIRLTNSEDQLQARPLVQAALGNEYLVALNMAASTPGWLKSLGAGP 121
            I  +S+ L +   L+   N++ Q  A   ++AALG++Y VA N+ ++ P WL  + A  
Sbjct: 60  NIAYQSAELSNDHLLVAFGNADVQKTAGDAIKAALGDDYTVAFNLKSTVPHWLSMIFARS 119

Query: 122 MKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRG--GDVQDNREIVL 179
           M LGLDL+GGVHFL+EVD    V ++    +  I+  LR++ IRY     +    + + +
Sbjct: 120 MPLGLDLQGGVHFLMEVDQSDVVDKQETRYADDIRSMLRDKNIRYDSVSRNAVRGQGVAV 179

Query: 180 SFRDEASRTEAFNMVRDQYNEFLL-DEQTEGDEFLLVLTLSEAEVTAIQDYALEQNLTTI 238
             R  A RT A N +  +Y +  + D Q  GD F+L   L   ++  I   A+ QNL T+
Sbjct: 180 VLRSAADRTAAANAIAAEYPDLSVQDGQVTGDRFVLNAVLRPDKLRDISLNAVRQNLGTL 239

Query: 239 RNRVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRMEARQDAPSSET 298
           RNR+N LGV+EP++QQQG  RIIVEL GVQDTA+AK+++GATA LE+R        + + 
Sbjct: 240 RNRINALGVSEPIIQQQGDSRIIVELAGVQDTAEAKKLIGATATLEYRAGYGSPQQAMDA 299

Query: 299 EEFG--------FRDQPQRTARLEQEVIATGNNVANAQQAFDE-NGQPQVNITMDSVGGD 349
           +  G        ++DQ      L +++I TG+ + +A    ++ +G P V++T+++ G  
Sbjct: 300 QRTGSVPPDARLYKDQRGNPVLLSKKIIVTGDQLVDAASGTEQQSGSPMVSVTLNAAGAK 359

Query: 350 LMNRATRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVVEKGIISLATVQSALGSSF 409
            M   T + +G+ M V+++E     ET++VDG+  EV    + + +I+ ATV    G +F
Sbjct: 360 KMLDFTTSNVGKPMGVVYVE--RVVETKVVDGK--EVRTPKITEEVINYATVNGVFGKNF 415

Query: 410 RITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFGLVLL 469
           + TGL S  EA+ELALLL+ G+LAAP+  V+ER IGPSLGQ NI  GM +V +G GLVLL
Sbjct: 416 QTTGLRSAKEASELALLLKGGSLAAPIDIVEERVIGPSLGQDNIAKGMKAVLIGLGLVLL 475

Query: 470 YMLVYYRGFGVVANIALTLNLMLLVACMSILSATLTLPGIAGIVLTVGMAVDANVLIFER 529
              +YY+ FG+VA++AL  NL++LVA MS++  TLT+PGIAGIVLT+GMA+DANVLI ER
Sbjct: 476 AAAIYYKLFGLVADVALFFNLVILVAVMSLVGVTLTMPGIAGIVLTLGMAIDANVLICER 535

Query: 530 IKEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLCIGIL 589
           ++EEL++G  P  +I +GY +A+ +I DAN+T L+ A+ L  MGSGP++GF VTL IGIL
Sbjct: 536 VREELRNGSSPHASIRAGYEKAWATILDANVTHLIAALALTTMGSGPIRGFGVTLLIGIL 595

Query: 590 TSMFSGLMVSRSIVNIVYGGRRVEKLSI 617
           TSMF+ + V+ +I  +++G R+++ LS+
Sbjct: 596 TSMFTSVTVTHAITALIHGHRKLKTLSV 623