Pairwise Alignments

Query, 624 a.a., preprotein translocase subunit SecD from Marinobacter adhaerens HP15

Subject, 686 a.a., preprotein translocase subunit SecD from Paraburkholderia bryophila 376MFSha3.1

 Score =  508 bits (1309), Expect = e-148
 Identities = 284/634 (44%), Positives = 413/634 (65%), Gaps = 39/634 (6%)

Query: 2   LNKYPLWKNLVILVALVIGFIYALPNLFPDDYAIQITGARSSTEVNAGVLDRAVGVLESR 61
           +N+YPLWK  V+LVALVIG +Y LPNLF +  A+Q++  +++ ++++  L      L + 
Sbjct: 1   MNRYPLWKYAVMLVALVIGLVYTLPNLFGEAPAVQVSSGKATVKLDSTTLSAVEAALAAN 60

Query: 62  GIEVKSSTLQDRDA----LIRLTNSEDQLQARPLVQAALGNE-----YLVALNMAASTPG 112
            I+    T  +  A     +RL +++ QL+ + L+Q +L ++     ++VALN+ +++P 
Sbjct: 61  QIKADDVTFDNTSANANIRVRLPDTDTQLRVKDLLQKSLNSDPTDPQFIVALNLQSASPR 120

Query: 113 WLKSLGAGPMKLGLDLRGGVHFLLEVDMETAVSQRLDAMSGQIKRELREERIRYRGGDVQ 172
           WL +L A PM LGLDLRGGVHFLL+VDM  A++++LD+ +   +  LR+  IR  GG  +
Sbjct: 121 WLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDASDARTLLRDNNIR-DGGVNR 179

Query: 173 DNREIVLSFRDEASRTEAFNMVRDQYNEFLLDEQTEGDEFL-LVLTLSEAEVTAIQDYAL 231
            N+ +V++F D+A+   A   +    +E     Q   D  + LV T + A   A+QD AL
Sbjct: 180 VNQTVVINFADQATADNAAKQLSRSISELQWTSQNSTDGSVQLVGTFTPAVQRAVQDAAL 239

Query: 232 EQNLTTIRNRVNELGVAEPLVQQQGADRIIVELPGVQDTAQAKRVLGATANLEFRM---- 287
           +QN+TT+ NRVNELGVAEP++QQQGADRI+VELPGVQDTA+AK ++G TA LE R+    
Sbjct: 240 KQNITTLHNRVNELGVAEPVIQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARLADPV 299

Query: 288 --EARQDAPSSETEEFGFRDQPQRTARLEQEVIATGNNVANAQQAFDENGQPQVNITMDS 345
                   P    +E  F    Q    L++++I TG+ + +A   FDE+ +P VNI +DS
Sbjct: 300 NTHPNPSDPVPPGDEL-FTHGNQTPVLLKKQIIFTGDRIIDASAGFDEHQRPSVNIRLDS 358

Query: 346 VGGDLMNRATRNAIGRRMAVLFIEYRTETETRMVDGEPQEVENRVVEKGIISLATVQSAL 405
            GG  +   +R+ IG+ MA++  E           GE            ++++AT+QS L
Sbjct: 359 AGGRAVRSVSRDNIGKPMAMVLFEKGK--------GE------------VLTVATIQSEL 398

Query: 406 GSSFRITGLDSIPEAAELALLLRAGALAAPMYFVQERTIGPSLGQKNIDAGMMSVALGFG 465
           G  F+ITG  +   AA+LALLLRAG+LAAPM  ++ERTIGPSLG  NI  G  SV  GF 
Sbjct: 399 GDRFQITGQATPQGAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFA 458

Query: 466 LVLLYMLVYYRGFGVVANIALTLNLMLLVACMSILSATLTLPGIAGIVLTVGMAVDANVL 525
            + ++M+ YY  FGV++ I L++NL+LL+A +S+L ATLTLPGIA I L +GMA+DANVL
Sbjct: 459 AIAVFMIAYYMLFGVISMIGLSVNLLLLIAVLSMLQATLTLPGIAAIALALGMAIDANVL 518

Query: 526 IFERIKEELKSGVPPQTAINSGYSRAFVSIFDANITTLLVAVILFAMGSGPVKGFAVTLC 585
           I ER++EEL++G PPQ AI +GY+ A+ +I D+N+TTL+  + L A GSGPV+GFA+  C
Sbjct: 519 INERVREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGIALLAFGSGPVRGFAIVHC 578

Query: 586 IGILTSMFSGLMVSRSIVNIVYGG-RRVEKLSIG 618
           IGILTSMFS +  SR IVN+ YGG ++++ L+IG
Sbjct: 579 IGILTSMFSAVFFSRGIVNLWYGGKKKLKSLAIG 612