Pairwise Alignments

Query, 876 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Marinobacter adhaerens HP15

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  351 bits (901), Expect = e-100
 Identities = 187/421 (44%), Positives = 274/421 (65%), Gaps = 12/421 (2%)

Query: 453  LEYLTHFDSVTELPNRLLFTDRLQQAILQAEWRKNVFSILYVDIDRFRQVNDSLGHTVGD 512
            L +L  FD++T LPNR LF DRL  AI QA    N+ ++L++D+DRF+ +NDS+GH +GD
Sbjct: 1078 LRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGD 1137

Query: 513  YVLCKVAERILACVAEADTVARWGGDEFIVLLPDRSGADASEIATCINGQLHSVIS---L 569
             +L  VA R+ + V E DTVAR GGDEF ++L    G   ++ AT I+ ++        L
Sbjct: 1138 LLLKAVAHRLQSAVREGDTVARLGGDEFTIIL---EGVAKTKAATLISEKVLKAFQAPFL 1194

Query: 570  ENGRELFVSCSMGIAECDGTGIDVDVLINRARTAMATIKEQGGNDYRHFIASDHGTLSDA 629
             + + L +S S+GI+       DVD LI  A TAM   K  G N+++ +    +   +  
Sbjct: 1195 LDDKSLNISTSIGISLYPNDAKDVDSLIKFADTAMYHAKALGRNNFQFYTNKLNEMATRH 1254

Query: 630  LALETSLRHALEERQLELYYQPQIDIASRQLVGLEALLRWQHPTEGLVPPDHFIPLAEKT 689
            + LET L+ A+   +L L YQP+  + +  L GLEALLRWQH   G + P  FIPLAE+T
Sbjct: 1255 MQLETGLKQAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPAEFIPLAEET 1314

Query: 690  GLIIPIGKWVLYEACRQAA-----AIPGLRVAVNLSARQFHQENLVTVVQEVLDKTGMPP 744
            G+I  IG WV+ ++C+Q A         + +AVNLSARQ  + ++++ ++  L  +G+P 
Sbjct: 1315 GMINQIGHWVINQSCQQLAEWNELGFSDISMAVNLSARQL-KADIISTIEVALAVSGLPA 1373

Query: 745  AYLELEITESALIYEVEAAIDTMSQLSSLGVSISLDDFGTGYSSLSYLKRFPIDTLKIDK 804
              LELE+TES ++   + +++ +S+L +LG++I++DDFGTGYSSLSYLKRFPIDTLKID+
Sbjct: 1374 KALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDR 1433

Query: 805  SFINEVTTDPGSEVIANTIIAMAHSLNLKVIAEGVETEEQLAMLRERECDQAQGYLIARP 864
             F+ ++T DP    I + IIA+AHSL L V+AEGVET+EQL  L  + CDQ QG+L+++P
Sbjct: 1434 EFVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKP 1493

Query: 865  M 865
            +
Sbjct: 1494 L 1494