Pairwise Alignments

Query, 876 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) from Marinobacter adhaerens HP15

Subject, 948 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  359 bits (922), Expect = e-103
 Identities = 196/422 (46%), Positives = 274/422 (64%), Gaps = 9/422 (2%)

Query: 452 QLEYLTHFDSVTELPNRLLFTDRLQQAILQAEWRKNVFSILYVDIDRFRQVNDSLGHTVG 511
           +LE+    D++T L NR +    L+QAI  AE +K    +++VD+DRF+ VND+LGH  G
Sbjct: 514 ELEFQASRDTLTGLINRHMLRHHLEQAIGVAERQKQALWVVFVDLDRFKFVNDTLGHKAG 573

Query: 512 DYVLCKVAERILACVAEADTVARWGGDEFIVLLP--DRSGADASEIATCINGQLHSVISL 569
           D +L  VA R+ A V EADTVAR GGDEFI++LP  D    D   +   ++     V   
Sbjct: 574 DTLLRTVAGRLRAAVREADTVARLGGDEFIMILPEQDELTLDTRSLQRIMDAVAAPVTL- 632

Query: 570 ENGRELFVSCSMGIAECDGTGIDVDVLINRARTAMATIKEQGGNDYRHFIASDHGTLSDA 629
             G  LF++CS+G+A     G D + LI  A  AM   K+ G N+++ +  + +    + 
Sbjct: 633 -GGHTLFMTCSVGVACYPNDGTDGETLIKHADIAMYRGKQTGRNNFQFYTPAMNEQALER 691

Query: 630 LALETSLRHALEERQLELYYQPQIDIASRQLVGLEALLRWQHPTEGLVPPDHFIPLAEKT 689
           L +E  LR+AL+  +  L+YQP++D+AS +++G EAL+RWQHP  G+V P  FI LAE+T
Sbjct: 692 LRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPARFIGLAEET 751

Query: 690 GLIIPIGKWVLYEACRQA-----AAIPGLRVAVNLSARQFHQENLVTVVQEVLDKTGMPP 744
           GLI+PIG WVL  AC Q           + V+VNLS  QF Q++LV+ + +VL+ TG+PP
Sbjct: 752 GLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADVLEDTGLPP 811

Query: 745 AYLELEITESALIYEVEAAIDTMSQLSSLGVSISLDDFGTGYSSLSYLKRFPIDTLKIDK 804
             LELE+TES ++ +VE AI  ++ L  LGV +S+DDFGTGYSSL+YLKRFPID LKID+
Sbjct: 812 ESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFPIDVLKIDR 871

Query: 805 SFINEVTTDPGSEVIANTIIAMAHSLNLKVIAEGVETEEQLAMLRERECDQAQGYLIARP 864
           SF+ ++T D     I  +II++A  L L+VIAEGVET+EQL  LR   CD+ QGYL + P
Sbjct: 872 SFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEIQGYLFSPP 931

Query: 865 MP 866
           +P
Sbjct: 932 VP 933