Pairwise Alignments

Query, 277 a.a., transposase OrfAB, subunit B from Marinobacter adhaerens HP15

Subject, 269 a.a., ISSod1, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  179 bits (455), Expect = 4e-50
 Identities = 104/262 (39%), Positives = 147/262 (56%), Gaps = 7/262 (2%)

Query: 12  IRRSSYYEYRQRRKHV-DVERLALKAQVNRLFTKSRSSAGSRTIKGMLNDDGVVIGRFKV 70
           + +S YY++ +R  +V  VE L L   V +LF +SR S G+R +   L  +G  +GR+ V
Sbjct: 3   VSKSGYYDWHKRPANVISVETLKLYRLVRQLFKQSRGSLGNREMVKKLRKEGYQVGRYLV 62

Query: 71  RRLMSELGLICKQPGPHAYKQATVERPD---IPNHLAREFTVDRPNQAWCGDITYVWSGQ 127
           R++M  L L   Q    AYK  T  +       N L   F     NQ W GD+TY+ +G+
Sbjct: 63  RKIMHRLRLKATQRC--AYKVTTQRKHSDAVADNLLNMNFNPVSANQVWAGDVTYLKTGE 120

Query: 128 RWSYLAVVLDLYARRVVGWAMSSSPDADLVVKALDHSWEQRGQPEKVMFHSDQGSQYASR 187
            W YLAVV+DLY+RR+VGW +      DL+ KAL  ++  R     ++FHSD+GSQY S+
Sbjct: 121 GWMYLAVVMDLYSRRIVGWRIDKRMTTDLISKALIKAYNLRQPARGLVFHSDRGSQYTSK 180

Query: 188 KFRQRLWRYRMTQSMSRRGNCWDNAPMERLFRSLKSEWIPALGYRNLPEAKKDVGGYLMD 247
           +F + L  Y +  SM   G CWDNA +ER F SLK +WI  +        K+DV  Y+  
Sbjct: 181 QFGRLLSSYGIRASMGDVGACWDNAVVERFFGSLKHDWIFKVAQPTREFMKQDVTAYI-K 239

Query: 248 YYNQQRPHTFNGGISPVAAEEN 269
           YYN +R H+ N  +SPV  E +
Sbjct: 240 YYNLERLHSANNDLSPVEFENS 261