Pairwise Alignments

Query, 703 a.a., TonB-dependent receptor protein from Marinobacter adhaerens HP15

Subject, 683 a.a., TonB-dependent receptor C-terminal region domain lipoprotein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (325), Expect = 4e-34
 Identities = 159/672 (23%), Positives = 262/672 (38%), Gaps = 55/672 (8%)

Query: 54  TDINQVLKTVPGVYVREEEGLGLRPNIGIRGATAERSSNVTLMEDGILIAPAPYSNPAAY 113
           TD    L  +  + +   +  G   NI +R AT      V +M+D +  +PAPYS P   
Sbjct: 45  TDDAMQLSNLNSLTLLRADHSGNSANISMRSAT----QGVAVMQDRVYFSPAPYSAPQLQ 100

Query: 114 YFPTLKRMSSLEVLKGAPLLRYGPQTTGGVVNLISTPIPDQRQGYIESVTNDRGSTDVHV 173
             P L    S+     A +   G Q + GVV+  S  I ++ Q     +    G+TD  V
Sbjct: 101 LLPHLLLQQSVTTTPLANMA-VGGQGSFGVVDYQSLNIIERSQSGSVQI---EGTTDSDV 156

Query: 174 TYGDTAG----DWGYLLETVQRSAKGF------KEIDRSNRDTGFDIEDYVGKLRWQGER 223
             G   G    ++G L        +G        + DR   D  F +      L      
Sbjct: 157 NAGMRWGVNQKEYGALFAANYIKEQGDAIFFNGSDADRKKMDMLFKVN--ASSLLGARSP 214

Query: 224 QSVTAKLQYSEETSNSSYLGLTDADFSQDPNRRYGLSSIDQMNNTHSGISLTHQFDWSNT 283
           Q      Q+ ++ S  S LG+T AD+ QDP   Y  ++ D+    H G    H++  S+ 
Sbjct: 215 QQTEFTYQFIDDDSYRSLLGITAADWQQDPLLLYSATAQDK----HQG--RQHKYQLSHQ 268

Query: 284 VSSTATLYRNDFKRNWF--KLSGGGSIIDSANG-GDANAQGILDGTVDASGLDYKN--NA 338
           V+   +   +DF   ++  +L   G+      G G        D    A+G D       
Sbjct: 269 VNLGDSKVMSDFYYQFYSQRLDQLGAFNGQNIGLGTLYDIAAFDRNPSANGADVNMLVQD 328

Query: 339 RDYLSEGVQVNFDVDMGSHQFDFGARYHEDEMD-RFQPVDVYDQVNGSLV--FQNTVAPT 395
            DY + G Q       G HQ  + ARYH D+ + RF       Q + S+V    N V   
Sbjct: 329 NDYSAFGAQTQSINQYGEHQITYSARYHTDKAEMRFGDQTALWQADRSIVRDESNAVLAY 388

Query: 396 GSNNRFETGEALSFWALDTWQATDKLSVNLALRYEDVKTGR-TQYADPGRTTIDSTRANE 454
             +    T    S W    WQ    + + L L YE V   R    A  G    D +    
Sbjct: 389 TDDATALTSAIDSLW---RWQG---MQIKLGLTYEHVSVNREVSLAFAGLDEADFS---- 438

Query: 455 SAELLPGTSFTYDLSQSWQVLGGVHRGFSPLGGGAKANEEPETSKNWEAGLRYFGNAFFA 514
            ++ +P     YD +  W+    + R ++    G    ++ + S +++   +Y  +   A
Sbjct: 439 DSDWMPQLGVLYD-AGDWRFSTDIRRAWAAASAG-NLTQDAQESLHYQVSAQYASDGIKA 496

Query: 515 EMIGFYSDFSNKAENCSVGSPCSNGATSGSFVTGEAEISGVEFQLQTGTRAGEFYLPVSL 574
           ++  +  +F N   +C   S C +          +    GVEF L   +  GE  LP+ L
Sbjct: 497 DLRAYVQEFDNLHVDCDSYSMCVDSRLLTQENIPDVLTYGVEFGLGYRSMLGELELPLEL 556

Query: 575 TYTFTQAEISKDNAA---SGLTKGEQLKDVPENQMSFRTGMEHPSGWDNYLVATYVDEMC 631
           +Y +  AE            + +G++L  +PE+Q+    G+E+ + +   LVA Y  E  
Sbjct: 557 SYQYLSAEYQTSTCTDIQGCVLEGDKLAWLPEHQLQLSAGIEY-AQYQLNLVAAYQSERD 615

Query: 632 VSAGCNNTATKLDETESLFLVDFISRYALTASADVFLKVDNVFDEQQIVSRLPDGAMANL 691
            S       ++L   +  +  D  + Y +     V+ +++N+FDE  + +    G     
Sbjct: 616 FS----QYGSELQRVDGQWRADIAANYDIDKHHRVYFRLENLFDESLVTTVSNSGIRTEN 671

Query: 692 PRTASLGISVNF 703
            R + LG    F
Sbjct: 672 GRISYLGYQWRF 683