Pairwise Alignments

Query, 867 a.a., TRAP-type uncharacterized transport system, fused permease component from Marinobacter adhaerens HP15

Subject, 427 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Pseudomonas aeruginosa PA14

 Score = 68.9 bits (167), Expect = 6e-16
 Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 13/203 (6%)

Query: 214 FVLFGALLERAGAGNYFIKVAYAMLGHMRGGPAKAAVVSSGLSGVISGSSIANVVTTGTF 273
           F+L GA +   G     I  A A +GH+RGG A AAV++  L   +SGSS A V   G+ 
Sbjct: 62  FLLSGAFMTTGGVARRLIDFANACVGHIRGGLAIAAVLACMLFAALSGSSPATVAAVGSI 121

Query: 274 TIPLMKRVGFPATKAGAVEVAASTNGQLTPPIMGAAAFLMVEYVGISYLEVIK---HAIL 330
            +  M R G+P      +   A T G L PP     + +MV Y   +   V K     ++
Sbjct: 122 AVAGMVRSGYPRAFGAGIICNAGTLGILIPP-----SIVMVVYAAATETSVGKLFVAGVV 176

Query: 331 PAMISYVALIYIVHLEA--CKLNMQGIERLNKPTLAQRLLNWVVILIGLSVLTLAVYYGV 388
           P ++  V L+ ++++ A   KL  Q      +   A R   W ++L+   V+ L   Y  
Sbjct: 177 PGLLLGVILMVVIYIVARVKKLPAQPRASFREWLAAARRAGWGLLLL---VIILGGIYSG 233

Query: 389 GWTKTLFGEAAMWVLAPLLVLIY 411
            +T T     A    A + + +Y
Sbjct: 234 LFTPTEAAAVAAVYSAFVALFVY 256



 Score = 32.0 bits (71), Expect = 8e-05
 Identities = 46/222 (20%), Positives = 95/222 (42%), Gaps = 31/222 (13%)

Query: 450 LLPVVVLVWCLTVERFSPQLSAFWATLFMIFIVVTQRPLKAFFYKHGNFLGEFKDGVFDL 509
           LL +V+++  +    F+P  +A  A ++  F+ +       F YK             D 
Sbjct: 220 LLLLVIILGGIYSGLFTPTEAAAVAAVYSAFVAL-------FVYKDMRLR--------DC 264

Query: 510 AHSLATGARNMVGIGVATATAGIVVGTVTLTGIGLVMTEFVEFLSGGNLLLMLIFTAIIS 569
              L    R  + +    A A +    +T   I   +TE+V    G   +  L+   ++ 
Sbjct: 265 PKVLLESGRLSIMLMFIIANAMLFAHVLTTEQIPQQITEWV-VQEGLTPIGFLLMVNVVL 323

Query: 570 LILGMGLPTTANYIVVSTLMAPVIVTLGAQNGLIVPLIAVHLFVFYFGILADDTPPVGLA 629
           L+ G  +  +A  ++++ +  P+ + LG     +  ++ V++ +   G++    PPVGL 
Sbjct: 324 LVAGSFMEPSAIVLILAPIFFPIAMKLGIDPIHLGIVMVVNMEI---GLVH---PPVGLN 377

Query: 630 AYAAAAISGADPIRTGIQGFTYDIRTAILPFMFIFNTQLLLI 671
            +  +A++G  P+   I+        A LP++ I    L+L+
Sbjct: 378 LFVTSAVTGM-PLGATIR--------AALPWLMILLLFLILV 410