Pairwise Alignments

Query, 348 a.a., recombinase A from Marinobacter adhaerens HP15

Subject, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis S2

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 33/222 (14%)

Query: 33  REAIPAVSTGSLGLDVALGIGGLPYGRICEIYGPESSGKTTLT----------------L 76
           R+++  +STGS  LD  L  GG+    + E  G   SGKT +                 L
Sbjct: 74  RQSVWRLSTGSTELDTVLA-GGIESQSVTEFAGMFGSGKTQIMHQTCVNLQIREKIFADL 132

Query: 77  QVIAEAQKAGKTCAFVDAEHALDPV----YAEKLGVN----VDDLLVSQPDTGEQAL--- 125
           + + E +       ++D E    P      AE  G++    +D+  V++    +  +   
Sbjct: 133 EGVVEEELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFA 192

Query: 126 -EIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTGNVKHA 184
            +I D++   N + ++I+DS+ + T + E  G      +  + + + + +  L       
Sbjct: 193 EKIEDLIKGGNNIKLVIIDSLTS-TFRNEFTGR---GKLAERQQKLGRHMATLNKLADLY 248

Query: 185 NCLMIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRR 226
           NC+++  NQ+  K    FG  E   GG+ +   ++ R  +R+
Sbjct: 249 NCIVLVTNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRK 290