Pairwise Alignments

Query, 348 a.a., recombinase A from Marinobacter adhaerens HP15

Subject, 216 a.a., DNA repair and recombination protein RadB from Methanococcus maripaludis S2

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 19/207 (9%)

Query: 53  GGLPYGRICEIYGPESSGKTTLTLQVIAEAQKAGKTCAFVDAEHALDPVYAEKL-GVNVD 111
           G +    I +IYGP   GKT + +  + +A + GK   ++D E +L     ++L G + D
Sbjct: 8   GNIEKKTITQIYGPPGVGKTNICIISMLKAIENGKNVVYIDTEGSLSIERIKQLSGKDCD 67

Query: 112 DLL----VSQPDTGEQALEIADMLVRSNAVDVIIVDSVAALTPKAEIEGEMGDSHVGLQA 167
           +LL    + +P + E+  E  + +     V +II+D + +L  + E+  ++ ++      
Sbjct: 68  ELLKNIIIYEPSSFEEQSEALEKIFLLENVGLIIIDGIVSLY-RLELCDKINEN--TKLN 124

Query: 168 RLMSQALRKLTGNVKHANCLMIFINQIRMKIGVMFGSPETTTGGNALKFYSS--VRLD-- 223
           R++ + +  L    +  N  ++  NQ++  I  +        GG  L+++S   ++++  
Sbjct: 125 RMLGKQISNLLKVSRQKNSGILITNQVKDSINGI-----EPAGGRLLEYWSKSIIKIEKS 179

Query: 224 --IRRIGAVKDGDEVVGNETRVKVVKN 248
             IR++   K      G   R K+++N
Sbjct: 180 ESIRKLTLEKHRHAKEGENLRFKILQN 206